Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.39■□□□□ 0.85
CDKN2DP55273 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDKN2DP55273 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKN2DP55273 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKN2DP55273 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKN2DP55273 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKN2DP55273 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKN2DP55273 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKN2DP55273 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 AL121603.2-201ENST00000557373 2117 ntBASIC20.38■□□□□ 0.85
CDKN2DP55273 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKN2DP55273 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKN2DP55273 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.38■□□□□ 0.85
CDKN2DP55273 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKN2DP55273 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDKN2DP55273 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKN2DP55273 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKN2DP55273 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKN2DP55273 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKN2DP55273 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.37■□□□□ 0.85
CDKN2DP55273 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 AC020907.5-201ENST00000624372 1936 ntBASIC20.37■□□□□ 0.85
CDKN2DP55273 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.37■□□□□ 0.85
CDKN2DP55273 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.37■□□□□ 0.85
CDKN2DP55273 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CDKN2DP55273 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKN2DP55273 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDKN2DP55273 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
CDKN2DP55273 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKN2DP55273 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKN2DP55273 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKN2DP55273 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 AC019069.1-201ENST00000610008 1333 ntBASIC20.36■□□□□ 0.85
CDKN2DP55273 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.36■□□□□ 0.85
CDKN2DP55273 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKN2DP55273 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 KRT19P1-201ENST00000405746 1186 ntBASIC20.36■□□□□ 0.85
CDKN2DP55273 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKN2DP55273 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDKN2DP55273 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.36■□□□□ 0.85
CDKN2DP55273 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2DP55273 RBM17P2-201ENST00000616397 1405 ntBASIC20.36■□□□□ 0.85
CDKN2DP55273 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKN2DP55273 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.35■□□□□ 0.85
CDKN2DP55273 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKN2DP55273 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDKN2DP55273 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKN2DP55273 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKN2DP55273 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.35■□□□□ 0.85
CDKN2DP55273 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDKN2DP55273 AC097381.1-201ENST00000429019 1296 ntBASIC20.35■□□□□ 0.85
CDKN2DP55273 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKN2DP55273 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2DP55273 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDKN2DP55273 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CDKN2DP55273 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKN2DP55273 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2DP55273 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2DP55273 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms