Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 TSPY9P-201ENST00000440215 945 ntBASIC17.56■□□□□ 0.4
MECP2P51608 TSPY11P-201ENST00000442607 1045 ntBASIC17.56■□□□□ 0.4
MECP2P51608 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.56■□□□□ 0.4
MECP2P51608 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.56■□□□□ 0.4
MECP2P51608 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.56■□□□□ 0.4
MECP2P51608 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 AC003102.1-202ENST00000563394 1796 ntBASIC17.56■□□□□ 0.4
MECP2P51608 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
MECP2P51608 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
MECP2P51608 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MECP2P51608 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MECP2P51608 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.55■□□□□ 0.4
MECP2P51608 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.55■□□□□ 0.4
MECP2P51608 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.55■□□□□ 0.4
MECP2P51608 UNC93B8-201ENST00000511903 705 ntBASIC17.55■□□□□ 0.4
MECP2P51608 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.55■□□□□ 0.4
MECP2P51608 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MECP2P51608 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.54■□□□□ 0.4
MECP2P51608 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MECP2P51608 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.54■□□□□ 0.4
MECP2P51608 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
MECP2P51608 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.54■□□□□ 0.4
MECP2P51608 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.54■□□□□ 0.4
MECP2P51608 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.54■□□□□ 0.4
MECP2P51608 AC010997.5-201ENST00000609182 354 ntBASIC17.54■□□□□ 0.4
MECP2P51608 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MECP2P51608 AC121338.2-201ENST00000622535 1744 ntBASIC17.54■□□□□ 0.4
MECP2P51608 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MECP2P51608 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MECP2P51608 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
MECP2P51608 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MECP2P51608 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.53■□□□□ 0.4
MECP2P51608 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 AL356441.2-201ENST00000443009 864 ntBASIC17.53■□□□□ 0.4
MECP2P51608 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.53■□□□□ 0.4
MECP2P51608 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 TNXA-203ENST00000507684 2038 ntBASIC17.53■□□□□ 0.4
MECP2P51608 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
MECP2P51608 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.53■□□□□ 0.4
MECP2P51608 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MECP2P51608 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MECP2P51608 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
MECP2P51608 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MECP2P51608 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.52■□□□□ 0.4
MECP2P51608 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MECP2P51608 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.52■□□□□ 0.4
MECP2P51608 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.52■□□□□ 0.4
MECP2P51608 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.52■□□□□ 0.4
MECP2P51608 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MECP2P51608 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MECP2P51608 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms