Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 RNF165-205ENST00000588679 2904 ntBASIC20.26■□□□□ 0.83
SLC1A6P48664 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A6P48664 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC1A6P48664 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC1A6P48664 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A6P48664 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A6P48664 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A6P48664 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC1A6P48664 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SLC1A6P48664 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 AL356441.2-201ENST00000443009 864 ntBASIC20.25■□□□□ 0.83
SLC1A6P48664 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC1A6P48664 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.25■□□□□ 0.83
SLC1A6P48664 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A6P48664 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC1A6P48664 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC1A6P48664 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SLC1A6P48664 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SLC1A6P48664 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 AC126544.1-201ENST00000580842 1059 ntBASIC20.24■□□□□ 0.83
SLC1A6P48664 AC233992.3-201ENST00000607491 485 ntBASIC20.24■□□□□ 0.83
SLC1A6P48664 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC1A6P48664 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC1A6P48664 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SLC1A6P48664 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A6P48664 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A6P48664 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A6P48664 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC1A6P48664 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A6P48664 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A6P48664 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SLC1A6P48664 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 AC131281.2-201ENST00000520478 145 ntBASIC20.23■□□□□ 0.83
SLC1A6P48664 IGHV3-19-201ENST00000521488 291 ntBASIC20.23■□□□□ 0.83
SLC1A6P48664 MIR4767-201ENST00000582827 78 ntBASIC20.23■□□□□ 0.83
SLC1A6P48664 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A6P48664 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC1A6P48664 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC1A6P48664 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SLC1A6P48664 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A6P48664 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A6P48664 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.22■□□□□ 0.83
SLC1A6P48664 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A6P48664 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A6P48664 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A6P48664 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A6P48664 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC1A6P48664 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SLC1A6P48664 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SLC1A6P48664 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC1A6P48664 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A6P48664 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLC1A6P48664 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC1A6P48664 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC1A6P48664 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC1A6P48664 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A6P48664 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC1A6P48664 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC1A6P48664 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC1A6P48664 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms