Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YOR146WYOR146W 306 nt3.97□□□□□ -1.77
VPS53P47061 YOR385WYOR385W 873 nt3.97□□□□□ -1.77
VPS53P47061 RSF2YJR127C 4143 nt3.97□□□□□ -1.77
VPS53P47061 PEX5YDR244W 1839 nt3.97□□□□□ -1.77
VPS53P47061 EMC1YCL045C 2283 nt3.97□□□□□ -1.77
VPS53P47061 CEP3YMR168C 1827 nt3.96□□□□□ -1.78
VPS53P47061 XRS2YDR369C 2565 nt3.96□□□□□ -1.78
VPS53P47061 UTP30YKR060W 825 nt3.96□□□□□ -1.78
VPS53P47061 CHD1YER164W 4407 nt3.96□□□□□ -1.78
VPS53P47061 YPR003CYPR003C 2265 nt3.96□□□□□ -1.78
VPS53P47061 NIC96YFR002W 2520 nt3.95□□□□□ -1.78
VPS53P47061 ARG5,6YER069W 2592 nt3.95□□□□□ -1.78
VPS53P47061 AKR1YDR264C 2295 nt3.95□□□□□ -1.78
VPS53P47061 KRI1YNL308C 1776 nt3.95□□□□□ -1.78
VPS53P47061 TAF6YGL112C 1551 nt3.95□□□□□ -1.78
VPS53P47061 ARF1YDL192W 546 nt3.95□□□□□ -1.78
VPS53P47061 GRX2YDR513W 432 nt3.95□□□□□ -1.78
VPS53P47061 JLP2YMR132C 627 nt3.95□□□□□ -1.78
VPS53P47061 SIP18YMR175W 240 nt3.95□□□□□ -1.78
VPS53P47061 YBL108WYBL108W 306 nt3.95□□□□□ -1.78
VPS53P47061 snR13snR13 124 nt3.95□□□□□ -1.78
VPS53P47061 VIP1YLR410W 3441 nt3.95□□□□□ -1.78
VPS53P47061 ISM1YPL040C 3009 nt3.95□□□□□ -1.78
VPS53P47061 SEG1YMR086W 2883 nt3.95□□□□□ -1.78
VPS53P47061 ERB1YMR049C 2424 nt3.94□□□□□ -1.78
VPS53P47061 FUN12YAL035W 3009 nt3.94□□□□□ -1.78
VPS53P47061 YEL1YBL060W 2064 nt3.94□□□□□ -1.78
VPS53P47061 YRM1YOR172W 2361 nt3.94□□□□□ -1.78
VPS53P47061 YBR259WYBR259W 2067 nt3.93□□□□□ -1.78
VPS53P47061 ALG8YOR067C 1734 nt3.93□□□□□ -1.78
VPS53P47061 YDR061WYDR061W 1620 nt3.93□□□□□ -1.78
VPS53P47061 OSH3YHR073W 2991 nt3.93□□□□□ -1.78
VPS53P47061 ADI1YMR009W 540 nt3.93□□□□□ -1.78
VPS53P47061 HHT2YNL031C 411 nt3.93□□□□□ -1.78
VPS53P47061 DIE2YGR227W 1578 nt3.93□□□□□ -1.78
VPS53P47061 MED1YPR070W 1701 nt3.92□□□□□ -1.78
VPS53P47061 STE5YDR103W 2754 nt3.92□□□□□ -1.78
VPS53P47061 MTC3YGL226W 372 nt3.92□□□□□ -1.78
VPS53P47061 YGR051CYGR051C 324 nt3.92□□□□□ -1.78
VPS53P47061 YPL142CYPL142C 318 nt3.92□□□□□ -1.78
VPS53P47061 snR36snR36 182 nt3.92□□□□□ -1.78
VPS53P47061 SSM4YIL030C 3960 nt3.92□□□□□ -1.78
VPS53P47061 YJR030CYJR030C 2238 nt3.92□□□□□ -1.78
VPS53P47061 LCB4YOR171C 1875 nt3.92□□□□□ -1.78
VPS53P47061 YPR022CYPR022C 3402 nt3.92□□□□□ -1.78
VPS53P47061 SLM2YNL047C 1971 nt3.91□□□□□ -1.78
VPS53P47061 HSP10YOR020C 321 nt3.91□□□□□ -1.78
VPS53P47061 APE2YKL157W 2859 nt3.9□□□□□ -1.78
VPS53P47061 YCR081C-AYCR081C-A 237 nt3.9□□□□□ -1.79
VPS53P47061 GPI8YDR331W 1236 nt3.9□□□□□ -1.79
VPS53P47061 RRT13YER066W 558 nt3.9□□□□□ -1.79
VPS53P47061 YHR214W-AYHR214W-A 486 nt3.9□□□□□ -1.79
VPS53P47061 YAR068WYAR068W 486 nt3.9□□□□□ -1.79
VPS53P47061 PFY1YOR122C 381 nt3.9□□□□□ -1.79
VPS53P47061 BIL1YOR304C-A 231 nt3.9□□□□□ -1.79
VPS53P47061 YOP1YPR028W 543 nt3.9□□□□□ -1.79
VPS53P47061 FLO10YKR102W 3510 nt3.9□□□□□ -1.79
VPS53P47061 JIP5YPR169W 1479 nt3.9□□□□□ -1.79
VPS53P47061 PBS2YJL128C 2007 nt3.9□□□□□ -1.79
VPS53P47061 MSH4YFL003C 2637 nt3.9□□□□□ -1.79
VPS53P47061 SSP1YHR184W 1716 nt3.9□□□□□ -1.79
VPS53P47061 SEC6YIL068C 2418 nt3.89□□□□□ -1.79
VPS53P47061 MTR4YJL050W 3222 nt3.89□□□□□ -1.79
VPS53P47061 RPL1BYGL135W 654 nt3.89□□□□□ -1.79
VPS53P47061 RPL39YJL189W 156 nt3.89□□□□□ -1.79
VPS53P47061 SHE2YKL130C 741 nt3.89□□□□□ -1.79
VPS53P47061 YLR031WYLR031W 561 nt3.89□□□□□ -1.79
VPS53P47061 LSM2YBL026W 288 nt3.89□□□□□ -1.79
VPS53P47061 DGK1YOR311C 873 nt3.89□□□□□ -1.79
VPS53P47061 YPL039WYPL039W 951 nt3.89□□□□□ -1.79
VPS53P47061 RPL1AYPL220W 654 nt3.89□□□□□ -1.79
VPS53P47061 ATG21YPL100W 1491 nt3.89□□□□□ -1.79
VPS53P47061 KRE5YOR336W 4098 nt3.89□□□□□ -1.79
VPS53P47061 SLA1YBL007C 3735 nt3.89□□□□□ -1.79
VPS53P47061 EMP70YLR083C 2004 nt3.88□□□□□ -1.79
VPS53P47061 RPS26BYER131W 360 nt3.88□□□□□ -1.79
VPS53P47061 YGL074CYGL074C 327 nt3.88□□□□□ -1.79
VPS53P47061 PET191YJR034W 327 nt3.88□□□□□ -1.79
VPS53P47061 JIP3YLR331C 378 nt3.88□□□□□ -1.79
VPS53P47061 TIR2YOR010C 756 nt3.88□□□□□ -1.79
VPS53P47061 MSD1YPL104W 1977 nt3.88□□□□□ -1.79
VPS53P47061 CBP2YHL038C 1893 nt3.88□□□□□ -1.79
VPS53P47061 YKL222CYKL222C 2118 nt3.88□□□□□ -1.79
VPS53P47061 ALA1YOR335C 2877 nt3.88□□□□□ -1.79
VPS53P47061 NUP159YIL115C 4383 nt3.87□□□□□ -1.79
VPS53P47061 tM(CAU)Q1tM(CAU)Q1 76 nt3.87□□□□□ -1.79
VPS53P47061 YIL012WYIL012W 342 nt3.87□□□□□ -1.79
VPS53P47061 tW(UCA)QtW(UCA)Q 74 nt3.87□□□□□ -1.79
VPS53P47061 LDS2YOL047C 1071 nt3.87□□□□□ -1.79
VPS53P47061 YPL080CYPL080C 327 nt3.87□□□□□ -1.79
VPS53P47061 YDL180WYDL180W 1644 nt3.87□□□□□ -1.79
VPS53P47061 RRN6YBL014C 2685 nt3.87□□□□□ -1.79
VPS53P47061 SPC72YAL047C 1869 nt3.86□□□□□ -1.79
VPS53P47061 RNR1YER070W 2667 nt3.86□□□□□ -1.79
VPS53P47061 RAD2YGR258C 3096 nt3.86□□□□□ -1.79
VPS53P47061 SPT4YGR063C 309 nt3.86□□□□□ -1.79
VPS53P47061 YJL202CYJL202C 348 nt3.86□□□□□ -1.79
VPS53P47061 RPS7BYNL096C 573 nt3.86□□□□□ -1.79
VPS53P47061 YBR137WYBR137W 540 nt3.86□□□□□ -1.79
VPS53P47061 SIN3YOL004W 4611 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms