Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 YOL085W-AYOL085W-A 213 nt5.34□□□□□ -1.55
VNX1P42839 YOR034C-AYOR034C-A 243 nt5.34□□□□□ -1.55
VNX1P42839 PUF3YLL013C 2640 nt5.34□□□□□ -1.55
VNX1P42839 THI21YPL258C 1656 nt5.34□□□□□ -1.56
VNX1P42839 MSH1YHR120W 2880 nt5.34□□□□□ -1.56
VNX1P42839 LCD1YDR499W 2244 nt5.33□□□□□ -1.56
VNX1P42839 NPC2YDL046W 522 nt5.33□□□□□ -1.56
VNX1P42839 HHF1YBR009C 312 nt5.33□□□□□ -1.56
VNX1P42839 PGM2YMR105C 1710 nt5.33□□□□□ -1.56
VNX1P42839 YDR109CYDR109C 2148 nt5.33□□□□□ -1.56
VNX1P42839 ELM1YKL048C 1923 nt5.33□□□□□ -1.56
VNX1P42839 YSH1YLR277C 2340 nt5.32□□□□□ -1.56
VNX1P42839 FRE4YNR060W 2160 nt5.32□□□□□ -1.56
VNX1P42839 MRC1YCL061C 3291 nt5.32□□□□□ -1.56
VNX1P42839 YDL022C-AYDL022C-A 249 nt5.32□□□□□ -1.56
VNX1P42839 ATP7YKL016C 525 nt5.32□□□□□ -1.56
VNX1P42839 DFG16YOR030W 1860 nt5.32□□□□□ -1.56
VNX1P42839 GPI1YGR216C 1830 nt5.32□□□□□ -1.56
VNX1P42839 PAT1YCR077C 2391 nt5.31□□□□□ -1.56
VNX1P42839 MDM20YOL076W 2391 nt5.31□□□□□ -1.56
VNX1P42839 PRP43YGL120C 2304 nt5.31□□□□□ -1.56
VNX1P42839 ACK1YDL203C 1872 nt5.31□□□□□ -1.56
VNX1P42839 ERI1YPL096C-A 207 nt5.31□□□□□ -1.56
VNX1P42839 KRI1YNL308C 1776 nt5.31□□□□□ -1.56
VNX1P42839 PAA1YDR071C 576 nt5.3□□□□□ -1.56
VNX1P42839 YNR042WYNR042W 429 nt5.3□□□□□ -1.56
VNX1P42839 RPL33AYPL143W 324 nt5.3□□□□□ -1.56
VNX1P42839 YOL153CYOL153C 1746 nt5.3□□□□□ -1.56
VNX1P42839 YEL1YBL060W 2064 nt5.3□□□□□ -1.56
VNX1P42839 FPK1YNR047W 2682 nt5.3□□□□□ -1.56
VNX1P42839 ESC8YOL017W 2145 nt5.29□□□□□ -1.56
VNX1P42839 FRE1YLR214W 2061 nt5.29□□□□□ -1.56
VNX1P42839 OST4YDL232W 111 nt5.29□□□□□ -1.56
VNX1P42839 CIN4YMR138W 576 nt5.29□□□□□ -1.56
VNX1P42839 GIS2YNL255C 462 nt5.29□□□□□ -1.56
VNX1P42839 UBC4YBR082C 447 nt5.29□□□□□ -1.56
VNX1P42839 SPB1YCL054W 2526 nt5.28□□□□□ -1.56
VNX1P42839 GCD6YDR211W 2139 nt5.28□□□□□ -1.56
VNX1P42839 YGR176WYGR176W 348 nt5.28□□□□□ -1.56
VNX1P42839 SUP19tS(UGA)E 82 nt5.28□□□□□ -1.56
VNX1P42839 SUP17tS(UGA)I 82 nt5.28□□□□□ -1.56
VNX1P42839 SUP16tS(UGA)P 82 nt5.28□□□□□ -1.56
VNX1P42839 FRE2YKL220C 2136 nt5.28□□□□□ -1.56
VNX1P42839 YOL057WYOL057W 2136 nt5.28□□□□□ -1.56
VNX1P42839 snR35snR35 204 nt5.28□□□□□ -1.56
VNX1P42839 ATG20YDL113C 1923 nt5.28□□□□□ -1.56
VNX1P42839 SSK22YCR073C 3996 nt5.27□□□□□ -1.57
VNX1P42839 YGR022CYGR022C 330 nt5.27□□□□□ -1.57
VNX1P42839 CDC27YBL084C 2277 nt5.27□□□□□ -1.57
VNX1P42839 PHO90YJL198W 2646 nt5.27□□□□□ -1.57
VNX1P42839 GPB2YAL056W 2643 nt5.27□□□□□ -1.57
VNX1P42839 STE13YOR219C 2796 nt5.26□□□□□ -1.57
VNX1P42839 YCR050CYCR050C 309 nt5.26□□□□□ -1.57
VNX1P42839 KEX2YNL238W 2445 nt5.26□□□□□ -1.57
VNX1P42839 SSY5YJL156C 2100 nt5.26□□□□□ -1.57
VNX1P42839 YKL222CYKL222C 2118 nt5.26□□□□□ -1.57
VNX1P42839 tX(XXX)DtX(XXX)D 100 nt5.25□□□□□ -1.57
VNX1P42839 YNL266WYNL266W 420 nt5.25□□□□□ -1.57
VNX1P42839 ISU1YPL135W 498 nt5.25□□□□□ -1.57
VNX1P42839 STB2YMR053C 2553 nt5.25□□□□□ -1.57
VNX1P42839 YAK1YJL141C 2424 nt5.25□□□□□ -1.57
VNX1P42839 ZRG17YNR039C 1818 nt5.25□□□□□ -1.57
VNX1P42839 MUK1YPL070W 1839 nt5.25□□□□□ -1.57
VNX1P42839 YBR238CYBR238C 2196 nt5.25□□□□□ -1.57
VNX1P42839 DPB11YJL090C 2295 nt5.25□□□□□ -1.57
VNX1P42839 FRS1YLR060W 1788 nt5.24□□□□□ -1.57
VNX1P42839 RAM2YKL019W 951 nt5.24□□□□□ -1.57
VNX1P42839 COX14YML129C 213 nt5.24□□□□□ -1.57
VNX1P42839 YNR075C-AYNR075C-A 93 nt5.24□□□□□ -1.57
VNX1P42839 KEL1YHR158C 3495 nt5.24□□□□□ -1.57
VNX1P42839 SLD3YGL113W 2007 nt5.23□□□□□ -1.57
VNX1P42839 PSP1YDR505C 2526 nt5.23□□□□□ -1.57
VNX1P42839 YRA1YDR381W 681 nt5.23□□□□□ -1.57
VNX1P42839 GEP4YHR100C 558 nt5.23□□□□□ -1.57
VNX1P42839 EMC6YLL014W 327 nt5.23□□□□□ -1.57
VNX1P42839 RRM3YHR031C 2172 nt5.22□□□□□ -1.57
VNX1P42839 YIR044CYIR044C 186 nt5.22□□□□□ -1.57
VNX1P42839 YML057C-AYML057C-A 390 nt5.22□□□□□ -1.57
VNX1P42839 QDR3YBR043C 2070 nt5.22□□□□□ -1.57
VNX1P42839 NOP4YPL043W 2058 nt5.22□□□□□ -1.57
VNX1P42839 RNR3YIL066C 2610 nt5.21□□□□□ -1.58
VNX1P42839 DLS1YJL065C 504 nt5.21□□□□□ -1.58
VNX1P42839 VPS54YDR027C 2670 nt5.2□□□□□ -1.58
VNX1P42839 MTC5YDR128W 3447 nt5.2□□□□□ -1.58
VNX1P42839 ERP6YGL002W 651 nt5.2□□□□□ -1.58
VNX1P42839 LCL1YPL056C 306 nt5.2□□□□□ -1.58
VNX1P42839 SFB3YHR098C 2790 nt5.2□□□□□ -1.58
VNX1P42839 ATP1YBL099W 1638 nt5.19□□□□□ -1.58
VNX1P42839 YDR239CYDR239C 2364 nt5.19□□□□□ -1.58
VNX1P42839 MCM4YPR019W 2802 nt5.19□□□□□ -1.58
VNX1P42839 YCR087C-AYCR087C-A 462 nt5.19□□□□□ -1.58
VNX1P42839 tT(UGU)Q1tT(UGU)Q1 76 nt5.19□□□□□ -1.58
VNX1P42839 TDA1YMR291W 1761 nt5.19□□□□□ -1.58
VNX1P42839 NHX1YDR456W 1902 nt5.19□□□□□ -1.58
VNX1P42839 COX5BYIL111W 456 nt5.18□□□□□ -1.58
VNX1P42839 VPS1YKR001C 2115 nt5.18□□□□□ -1.58
VNX1P42839 TFB1YDR311W 1929 nt5.17□□□□□ -1.58
VNX1P42839 SEC9YGR009C 1956 nt5.17□□□□□ -1.58
VNX1P42839 YCR075W-AYCR075W-A 228 nt5.17□□□□□ -1.58
VNX1P42839 YJL222W-BYJL222W-B 138 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms