Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 CCE1YKL011C 1062 nt2.13□□□□□ -2.07
RTR1P40084 YML094C-AYML094C-A 402 nt2.13□□□□□ -2.07
RTR1P40084 IGO1YNL157W 507 nt2.13□□□□□ -2.07
RTR1P40084 HEM4YOR278W 828 nt2.13□□□□□ -2.07
RTR1P40084 BAS1YKR099W 2436 nt2.13□□□□□ -2.07
RTR1P40084 AEP1YMR064W 1557 nt2.13□□□□□ -2.07
RTR1P40084 RGA1YOR127W 3024 nt2.13□□□□□ -2.07
RTR1P40084 MSL5YLR116W 1431 nt2.12□□□□□ -2.07
RTR1P40084 CKA1YIL035C 1119 nt2.12□□□□□ -2.07
RTR1P40084 ATG10YLL042C 504 nt2.12□□□□□ -2.07
RTR1P40084 COA6YMR244C-A 315 nt2.12□□□□□ -2.07
RTR1P40084 RBK1YCR036W 1002 nt2.11□□□□□ -2.07
RTR1P40084 DPP1YDR284C 870 nt2.11□□□□□ -2.07
RTR1P40084 KEI1YDR367W 666 nt2.11□□□□□ -2.07
RTR1P40084 MVB12YGR206W 306 nt2.11□□□□□ -2.07
RTR1P40084 TRM7YBR061C 933 nt2.11□□□□□ -2.07
RTR1P40084 YJL049WYJL049W 1353 nt2.1□□□□□ -2.07
RTR1P40084 TRM3YDL112W 4311 nt2.1□□□□□ -2.07
RTR1P40084 BI3Q0115 1554 nt2.1□□□□□ -2.07
RTR1P40084 ADK1YDR226W 669 nt2.1□□□□□ -2.07
RTR1P40084 COG7YGL005C 840 nt2.1□□□□□ -2.07
RTR1P40084 YLR224WYLR224W 1110 nt2.1□□□□□ -2.07
RTR1P40084 CTL1YMR180C 963 nt2.1□□□□□ -2.07
RTR1P40084 UBX3YDL091C 1368 nt2.1□□□□□ -2.07
RTR1P40084 COS111YBR203W 2775 nt2.1□□□□□ -2.07
RTR1P40084 GPI17YDR434W 1605 nt2.09□□□□□ -2.07
RTR1P40084 IST2YBR086C 2841 nt2.09□□□□□ -2.07
RTR1P40084 BRR2YER172C 6492 nt2.09□□□□□ -2.07
RTR1P40084 KAR5YMR065W 1515 nt2.09□□□□□ -2.07
RTR1P40084 UBP16YPL072W 1500 nt2.09□□□□□ -2.07
RTR1P40084 YEA4YEL004W 1029 nt2.09□□□□□ -2.07
RTR1P40084 GLC7YER133W 939 nt2.09□□□□□ -2.07
RTR1P40084 YNR034W-AYNR034W-A 297 nt2.09□□□□□ -2.07
RTR1P40084 NTC20YBR188C 423 nt2.09□□□□□ -2.07
RTR1P40084 GCN2YDR283C 4980 nt2.09□□□□□ -2.08
RTR1P40084 YMR045CYMR045C 5268 nt2.09□□□□□ -2.08
RTR1P40084 PRP6YBR055C 2700 nt2.08□□□□□ -2.08
RTR1P40084 HOT13YKL084W 351 nt2.08□□□□□ -2.08
RTR1P40084 VPS16YPL045W 2397 nt2.08□□□□□ -2.08
RTR1P40084 CTF4YPR135W 2784 nt2.08□□□□□ -2.08
RTR1P40084 YPR089WYPR089W 2667 nt2.07□□□□□ -2.08
RTR1P40084 YBP2YGL060W 1926 nt2.07□□□□□ -2.08
RTR1P40084 SRD1YCR018C 666 nt2.07□□□□□ -2.08
RTR1P40084 YHL037CYHL037C 402 nt2.07□□□□□ -2.08
RTR1P40084 YOL118CYOL118C 309 nt2.07□□□□□ -2.08
RTR1P40084 YPR145C-AYPR145C-A 237 nt2.07□□□□□ -2.08
RTR1P40084 YHR214C-BYHR214C-B 5382 nt2.07□□□□□ -2.08
RTR1P40084 RSM23YGL129C 1353 nt2.07□□□□□ -2.08
RTR1P40084 YIL166CYIL166C 1629 nt2.06□□□□□ -2.08
RTR1P40084 NIC96YFR002W 2520 nt2.06□□□□□ -2.08
RTR1P40084 YGL177WYGL177W 348 nt2.06□□□□□ -2.08
RTR1P40084 YKR051WYKR051W 1257 nt2.06□□□□□ -2.08
RTR1P40084 FAR3YMR052W 615 nt2.06□□□□□ -2.08
RTR1P40084 YMR075C-AYMR075C-A 366 nt2.06□□□□□ -2.08
RTR1P40084 SLM4YBR077C 489 nt2.06□□□□□ -2.08
RTR1P40084 UBC9YDL064W 474 nt2.05□□□□□ -2.08
RTR1P40084 PLP1YDR183W 693 nt2.05□□□□□ -2.08
RTR1P40084 RPS17BYDR447C 411 nt2.05□□□□□ -2.08
RTR1P40084 GUK1YDR454C 564 nt2.05□□□□□ -2.08
RTR1P40084 PPE1YHR075C 1203 nt2.05□□□□□ -2.08
RTR1P40084 YJL032WYJL032W 315 nt2.05□□□□□ -2.08
RTR1P40084 BFR1YOR198C 1413 nt2.05□□□□□ -2.08
RTR1P40084 SBE22YHR103W 2559 nt2.04□□□□□ -2.08
RTR1P40084 RRI1YDL216C 1323 nt2.04□□□□□ -2.08
RTR1P40084 YDR381C-AYDR381C-A 345 nt2.04□□□□□ -2.08
RTR1P40084 CCH1YGR217W 6120 nt2.04□□□□□ -2.08
RTR1P40084 YJL147CYJL147C 1149 nt2.04□□□□□ -2.08
RTR1P40084 YLR050CYLR050C 486 nt2.04□□□□□ -2.08
RTR1P40084 VTI1YMR197C 654 nt2.04□□□□□ -2.08
RTR1P40084 RPL16BYNL069C 597 nt2.04□□□□□ -2.08
RTR1P40084 LYS9YNR050C 1341 nt2.04□□□□□ -2.08
RTR1P40084 IRC14YOR135C 342 nt2.04□□□□□ -2.08
RTR1P40084 YOR093CYOR093C 4947 nt2.04□□□□□ -2.08
RTR1P40084 NPR1YNL183C 2373 nt2.03□□□□□ -2.08
RTR1P40084 NCB2YDR397C 441 nt2.03□□□□□ -2.08
RTR1P40084 YOR146WYOR146W 306 nt2.03□□□□□ -2.08
RTR1P40084 PCK1YKR097W 1650 nt2.02□□□□□ -2.09
RTR1P40084 YCR108CYCR108C 192 nt2.02□□□□□ -2.09
RTR1P40084 GTR2YGR163W 1026 nt2.02□□□□□ -2.09
RTR1P40084 CSI1YMR025W 888 nt2.02□□□□□ -2.09
RTR1P40084 UTP5YDR398W 1932 nt2.01□□□□□ -2.09
RTR1P40084 SSP1YHR184W 1716 nt2.01□□□□□ -2.09
RTR1P40084 CAP1YKL007W 807 nt2.01□□□□□ -2.09
RTR1P40084 RRT16YNL105W 429 nt2.01□□□□□ -2.09
RTR1P40084 YNL234WYNL234W 1281 nt2.01□□□□□ -2.09
RTR1P40084 YBR277CYBR277C 402 nt2.01□□□□□ -2.09
RTR1P40084 RTT101YJL047C 2529 nt2.01□□□□□ -2.09
RTR1P40084 PIG2YIL045W 1617 nt2.01□□□□□ -2.09
RTR1P40084 ELG1YOR144C 2376 nt2□□□□□ -2.09
RTR1P40084 SHR3YDL212W 633 nt2□□□□□ -2.09
RTR1P40084 TVP15YDR100W 432 nt2□□□□□ -2.09
RTR1P40084 MEI4YER044C-A 1227 nt2□□□□□ -2.09
RTR1P40084 YGL014C-AYGL014C-A 162 nt2□□□□□ -2.09
RTR1P40084 MEI5YPL121C 669 nt2□□□□□ -2.09
RTR1P40084 IPT1YDR072C 1584 nt2□□□□□ -2.09
RTR1P40084 YDR336WYDR336W 945 nt1.99□□□□□ -2.09
RTR1P40084 MAM1YER106W 909 nt1.99□□□□□ -2.09
RTR1P40084 RRF1YHR038W 693 nt1.99□□□□□ -2.09
RTR1P40084 YKE2YLR200W 345 nt1.99□□□□□ -2.09
RTR1P40084 PEP12YOR036W 867 nt1.99□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms