Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.55■□□□□ 0.72
RPL3P39023 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.55■□□□□ 0.72
RPL3P39023 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.55■□□□□ 0.72
RPL3P39023 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.55■□□□□ 0.72
RPL3P39023 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RPL3P39023 TERF1P2-201ENST00000583350 1212 ntBASIC19.55■□□□□ 0.72
RPL3P39023 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.55■□□□□ 0.72
RPL3P39023 AC104187.1-201ENST00000607510 612 ntBASIC19.55■□□□□ 0.72
RPL3P39023 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.55■□□□□ 0.72
RPL3P39023 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
RPL3P39023 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 AC073314.1-201ENST00000568729 2216 ntBASIC19.54■□□□□ 0.72
RPL3P39023 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.54■□□□□ 0.72
RPL3P39023 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.54■□□□□ 0.72
RPL3P39023 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.54■□□□□ 0.72
RPL3P39023 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.54■□□□□ 0.72
RPL3P39023 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.54■□□□□ 0.72
RPL3P39023 AP001160.3-201ENST00000601484 763 ntBASIC19.54■□□□□ 0.72
RPL3P39023 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.54■□□□□ 0.72
RPL3P39023 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.54■□□□□ 0.72
RPL3P39023 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPL3P39023 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RPL3P39023 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPL3P39023 AC020907.5-201ENST00000624372 1936 ntBASIC19.53■□□□□ 0.72
RPL3P39023 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPL3P39023 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RPL3P39023 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.53■□□□□ 0.72
RPL3P39023 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.53■□□□□ 0.72
RPL3P39023 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.53■□□□□ 0.72
RPL3P39023 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RPL3P39023 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPL3P39023 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RPL3P39023 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.52■□□□□ 0.72
RPL3P39023 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RPL3P39023 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.52■□□□□ 0.72
RPL3P39023 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.52■□□□□ 0.72
RPL3P39023 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPL3P39023 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.52■□□□□ 0.72
RPL3P39023 AC027702.1-201ENST00000563810 1770 ntBASIC19.52■□□□□ 0.71
RPL3P39023 AC116050.2-201ENST00000612102 1779 ntBASIC19.52■□□□□ 0.71
RPL3P39023 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPL3P39023 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.52■□□□□ 0.71
RPL3P39023 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.52■□□□□ 0.71
RPL3P39023 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 AC073130.3-201ENST00000624389 2278 ntBASIC19.51■□□□□ 0.71
RPL3P39023 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.51■□□□□ 0.71
RPL3P39023 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RPL3P39023 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL3P39023 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.51■□□□□ 0.71
RPL3P39023 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
RPL3P39023 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.5■□□□□ 0.71
RPL3P39023 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RPL3P39023 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms