Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 HHF1YBR009C 312 nt3.94□□□□□ -1.78
PEX28P38848 JEN1YKL217W 1851 nt3.94□□□□□ -1.78
PEX28P38848 ATP22YDR350C 2055 nt3.93□□□□□ -1.78
PEX28P38848 YEL018C-AYEL018C-A 534 nt3.93□□□□□ -1.78
PEX28P38848 RAD6YGL058W 519 nt3.93□□□□□ -1.78
PEX28P38848 NOP19YGR251W 591 nt3.93□□□□□ -1.78
PEX28P38848 YHR139C-AYHR139C-A 312 nt3.93□□□□□ -1.78
PEX28P38848 YPR010C-AYPR010C-A 219 nt3.93□□□□□ -1.78
PEX28P38848 STE5YDR103W 2754 nt3.93□□□□□ -1.78
PEX28P38848 SPC72YAL047C 1869 nt3.92□□□□□ -1.78
PEX28P38848 SLP1YOR154W 1764 nt3.92□□□□□ -1.78
PEX28P38848 ACE2YLR131C 2313 nt3.92□□□□□ -1.78
PEX28P38848 GPI8YDR331W 1236 nt3.92□□□□□ -1.78
PEX28P38848 AIM11YER093C-A 414 nt3.92□□□□□ -1.78
PEX28P38848 COX19YLL018C-A 297 nt3.92□□□□□ -1.78
PEX28P38848 RPL37AYLR185W 267 nt3.92□□□□□ -1.78
PEX28P38848 YLR416CYLR416C 399 nt3.92□□□□□ -1.78
PEX28P38848 YNL337WYNL337W 255 nt3.92□□□□□ -1.78
PEX28P38848 snR36snR36 182 nt3.92□□□□□ -1.78
PEX28P38848 APL4YPR029C 2499 nt3.92□□□□□ -1.78
PEX28P38848 YSW1YBR148W 1830 nt3.91□□□□□ -1.78
PEX28P38848 FRQ1YDR373W 573 nt3.91□□□□□ -1.78
PEX28P38848 MUS81YDR386W 1899 nt3.91□□□□□ -1.78
PEX28P38848 YER066C-AYER066C-A 501 nt3.91□□□□□ -1.78
PEX28P38848 RPS21BYJL136C 264 nt3.91□□□□□ -1.78
PEX28P38848 YKL183C-AYKL183C-A 213 nt3.91□□□□□ -1.78
PEX28P38848 YDL180WYDL180W 1644 nt3.91□□□□□ -1.78
PEX28P38848 RPG1YBR079C 2895 nt3.91□□□□□ -1.78
PEX28P38848 ULS1YOR191W 4860 nt3.9□□□□□ -1.78
PEX28P38848 YCR018C-AYCR018C-A 255 nt3.9□□□□□ -1.79
PEX28P38848 SRL3YKR091W 741 nt3.9□□□□□ -1.79
PEX28P38848 RPL23AYBL087C 414 nt3.9□□□□□ -1.79
PEX28P38848 MDM32YOR147W 1869 nt3.9□□□□□ -1.79
PEX28P38848 SEC6YIL068C 2418 nt3.9□□□□□ -1.79
PEX28P38848 FAS2YPL231W 5664 nt3.89□□□□□ -1.79
PEX28P38848 FMP10YER182W 735 nt3.89□□□□□ -1.79
PEX28P38848 FMP32YFL046W 624 nt3.89□□□□□ -1.79
PEX28P38848 RPL1BYGL135W 654 nt3.89□□□□□ -1.79
PEX28P38848 BCD1YHR040W 1101 nt3.89□□□□□ -1.79
PEX28P38848 YIL021C-AYIL021C-A 270 nt3.89□□□□□ -1.79
PEX28P38848 YJR023CYJR023C 402 nt3.89□□□□□ -1.79
PEX28P38848 SHE2YKL130C 741 nt3.89□□□□□ -1.79
PEX28P38848 YPL025CYPL025C 558 nt3.89□□□□□ -1.79
PEX28P38848 RPL1AYPL220W 654 nt3.89□□□□□ -1.79
PEX28P38848 DPB11YJL090C 2295 nt3.89□□□□□ -1.79
PEX28P38848 ROD1YOR018W 2514 nt3.89□□□□□ -1.79
PEX28P38848 URB2YJR041C 3525 nt3.88□□□□□ -1.79
PEX28P38848 RPS13YDR064W 456 nt3.88□□□□□ -1.79
PEX28P38848 YKL111CYKL111C 336 nt3.88□□□□□ -1.79
PEX28P38848 ECM16YMR128W 3804 nt3.88□□□□□ -1.79
PEX28P38848 HOYDL227C 1761 nt3.88□□□□□ -1.79
PEX28P38848 VID28YIL017C 2766 nt3.88□□□□□ -1.79
PEX28P38848 YDL176WYDL176W 2127 nt3.88□□□□□ -1.79
PEX28P38848 GRS2YPR081C 1857 nt3.88□□□□□ -1.79
PEX28P38848 IRC4YDR540C 540 nt3.87□□□□□ -1.79
PEX28P38848 RPC10YHR143W-A 213 nt3.87□□□□□ -1.79
PEX28P38848 PAU23YLR037C 375 nt3.87□□□□□ -1.79
PEX28P38848 YPL238CYPL238C 390 nt3.87□□□□□ -1.79
PEX28P38848 21S_rRNA21S_rRNA 3296 nt3.87□□□□□ -1.79
PEX28P38848 UBP5YER144C 2418 nt3.87□□□□□ -1.79
PEX28P38848 KHA1YJL094C 2622 nt3.87□□□□□ -1.79
PEX28P38848 NDT80YHR124W 1884 nt3.86□□□□□ -1.79
PEX28P38848 TAF6YGL112C 1551 nt3.86□□□□□ -1.79
PEX28P38848 ATG2YNL242W 4779 nt3.86□□□□□ -1.79
PEX28P38848 TIF35YDR429C 825 nt3.86□□□□□ -1.79
PEX28P38848 tM(CAU)Q1tM(CAU)Q1 76 nt3.86□□□□□ -1.79
PEX28P38848 MSL1YIR009W 336 nt3.86□□□□□ -1.79
PEX28P38848 YJR140W-AYJR140W-A 150 nt3.86□□□□□ -1.79
PEX28P38848 YLR031WYLR031W 561 nt3.86□□□□□ -1.79
PEX28P38848 YPR053CYPR053C 456 nt3.86□□□□□ -1.79
PEX28P38848 SPT23YKL020C 3249 nt3.86□□□□□ -1.79
PEX28P38848 YPK9YOR291W 4419 nt3.86□□□□□ -1.79
PEX28P38848 TAF7YMR227C 1773 nt3.86□□□□□ -1.79
PEX28P38848 VPS53YJL029C 2469 nt3.85□□□□□ -1.79
PEX28P38848 ARG2YJL071W 1725 nt3.85□□□□□ -1.79
PEX28P38848 FAA2YER015W 2235 nt3.85□□□□□ -1.79
PEX28P38848 MCD4YKL165C 2760 nt3.85□□□□□ -1.79
PEX28P38848 YER188C-AYER188C-A 300 nt3.85□□□□□ -1.79
PEX28P38848 YJL202CYJL202C 348 nt3.85□□□□□ -1.79
PEX28P38848 PRE8YML092C 753 nt3.85□□□□□ -1.79
PEX28P38848 CPA2YJR109C 3357 nt3.85□□□□□ -1.79
PEX28P38848 NDD1YOR372C 1665 nt3.84□□□□□ -1.79
PEX28P38848 BAR1YIL015W 1764 nt3.84□□□□□ -1.79
PEX28P38848 GCN4YEL009C 846 nt3.84□□□□□ -1.79
PEX28P38848 JLP2YMR132C 627 nt3.84□□□□□ -1.79
PEX28P38848 IMP4YNL075W 873 nt3.84□□□□□ -1.79
PEX28P38848 GPI13YLL031C 3054 nt3.84□□□□□ -1.79
PEX28P38848 KIP3YGL216W 2418 nt3.84□□□□□ -1.8
PEX28P38848 PIM1YBL022C 3402 nt3.84□□□□□ -1.8
PEX28P38848 PMC1YGL006W 3522 nt3.84□□□□□ -1.8
PEX28P38848 NUP60YAR002W 1620 nt3.84□□□□□ -1.8
PEX28P38848 CWC22YGR278W 1734 nt3.84□□□□□ -1.8
PEX28P38848 CIN1YOR349W 3045 nt3.84□□□□□ -1.8
PEX28P38848 HFM1YGL251C 3564 nt3.83□□□□□ -1.8
PEX28P38848 YDR183C-AYDR183C-A 258 nt3.83□□□□□ -1.8
PEX28P38848 RMT2YDR465C 1239 nt3.83□□□□□ -1.8
PEX28P38848 ATP25YMR098C 1839 nt3.83□□□□□ -1.8
PEX28P38848 MSD1YPL104W 1977 nt3.83□□□□□ -1.8
PEX28P38848 PEP5YMR231W 3090 nt3.82□□□□□ -1.8
PEX28P38848 YGR237CYGR237C 2358 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms