Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SERBP1P1-201ENST00000396021 1160 ntBASIC16.9■□□□□ 0.3
SNCAP37840 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNCAP37840 AL356441.2-201ENST00000443009 864 ntBASIC16.9■□□□□ 0.3
SNCAP37840 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.9■□□□□ 0.3
SNCAP37840 AP005435.1-201ENST00000529293 1178 ntBASIC16.9■□□□□ 0.3
SNCAP37840 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.9■□□□□ 0.3
SNCAP37840 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.9■□□□□ 0.3
SNCAP37840 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SNCAP37840 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNCAP37840 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.9■□□□□ 0.3
SNCAP37840 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SNCAP37840 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
SNCAP37840 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.89■□□□□ 0.29
SNCAP37840 AC011298.3-201ENST00000615796 283 ntBASIC16.89■□□□□ 0.29
SNCAP37840 AC136469.2-201ENST00000623944 1028 ntBASIC16.89■□□□□ 0.29
SNCAP37840 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.89■□□□□ 0.29
SNCAP37840 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNCAP37840 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.89■□□□□ 0.29
SNCAP37840 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.89■□□□□ 0.29
SNCAP37840 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNCAP37840 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
SNCAP37840 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 AL049796.1-201ENST00000565336 1766 ntBASIC16.88■□□□□ 0.29
SNCAP37840 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
SNCAP37840 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.88■□□□□ 0.29
SNCAP37840 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.88■□□□□ 0.29
SNCAP37840 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNCAP37840 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SNCAP37840 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SNCAP37840 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.87■□□□□ 0.29
SNCAP37840 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.87■□□□□ 0.29
SNCAP37840 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.87■□□□□ 0.29
SNCAP37840 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.87■□□□□ 0.29
SNCAP37840 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.87■□□□□ 0.29
SNCAP37840 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SNCAP37840 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SNCAP37840 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.87■□□□□ 0.29
SNCAP37840 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.87■□□□□ 0.29
SNCAP37840 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SNCAP37840 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.87■□□□□ 0.29
SNCAP37840 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNCAP37840 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms