Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LSP1P33241 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
LSP1P33241 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LSP1P33241 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.7■□□□□ 0.9
LSP1P33241 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LSP1P33241 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LSP1P33241 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
LSP1P33241 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSP1P33241 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.69■□□□□ 0.9
LSP1P33241 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.69■□□□□ 0.9
LSP1P33241 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.69■□□□□ 0.9
LSP1P33241 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSP1P33241 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.68■□□□□ 0.9
LSP1P33241 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.68■□□□□ 0.9
LSP1P33241 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LSP1P33241 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LSP1P33241 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.68■□□□□ 0.9
LSP1P33241 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.68■□□□□ 0.9
LSP1P33241 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSP1P33241 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.67■□□□□ 0.9
LSP1P33241 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.67■□□□□ 0.9
LSP1P33241 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LSP1P33241 AC068587.7-201ENST00000641602 218 ntBASIC20.67■□□□□ 0.9
LSP1P33241 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.67■□□□□ 0.9
LSP1P33241 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LSP1P33241 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSP1P33241 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.66■□□□□ 0.9
LSP1P33241 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.66■□□□□ 0.9
LSP1P33241 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.66■□□□□ 0.9
LSP1P33241 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSP1P33241 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.66■□□□□ 0.9
LSP1P33241 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.66■□□□□ 0.9
LSP1P33241 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSP1P33241 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSP1P33241 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSP1P33241 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSP1P33241 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.66■□□□□ 0.9
LSP1P33241 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms