Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.54■□□□□ 0.56
APEX1P27695 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APEX1P27695 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APEX1P27695 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APEX1P27695 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APEX1P27695 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
APEX1P27695 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APEX1P27695 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.54■□□□□ 0.56
APEX1P27695 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.53■□□□□ 0.56
APEX1P27695 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.53■□□□□ 0.56
APEX1P27695 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 AL049796.1-201ENST00000565336 1766 ntBASIC18.53■□□□□ 0.56
APEX1P27695 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.53■□□□□ 0.56
APEX1P27695 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.53■□□□□ 0.56
APEX1P27695 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APEX1P27695 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.53■□□□□ 0.56
APEX1P27695 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.53■□□□□ 0.56
APEX1P27695 GABARAPL3-202ENST00000624044 1851 ntBASIC18.53■□□□□ 0.56
APEX1P27695 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.53■□□□□ 0.56
APEX1P27695 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.53■□□□□ 0.56
APEX1P27695 LINC02228-203ENST00000641970 1355 ntBASIC18.53■□□□□ 0.56
APEX1P27695 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.53■□□□□ 0.56
APEX1P27695 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
APEX1P27695 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.52■□□□□ 0.56
APEX1P27695 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
APEX1P27695 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 AC123595.1-201ENST00000440769 1046 ntBASIC18.52■□□□□ 0.56
APEX1P27695 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
APEX1P27695 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.52■□□□□ 0.56
APEX1P27695 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APEX1P27695 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
APEX1P27695 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.51■□□□□ 0.55
APEX1P27695 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
APEX1P27695 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
APEX1P27695 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
APEX1P27695 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
APEX1P27695 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.51■□□□□ 0.55
APEX1P27695 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.51■□□□□ 0.55
APEX1P27695 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.51■□□□□ 0.55
APEX1P27695 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
APEX1P27695 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
APEX1P27695 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APEX1P27695 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
APEX1P27695 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.51■□□□□ 0.55
APEX1P27695 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 AP005212.1-201ENST00000581547 1997 ntBASIC18.5■□□□□ 0.55
APEX1P27695 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.5■□□□□ 0.55
APEX1P27695 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
APEX1P27695 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.5■□□□□ 0.55
APEX1P27695 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.5■□□□□ 0.55
APEX1P27695 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.5■□□□□ 0.55
APEX1P27695 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
APEX1P27695 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.5■□□□□ 0.55
APEX1P27695 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.5■□□□□ 0.55
APEX1P27695 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APEX1P27695 AL020996.1-203ENST00000536896 2307 ntBASIC18.5■□□□□ 0.55
APEX1P27695 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.5■□□□□ 0.55
APEX1P27695 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.5■□□□□ 0.55
APEX1P27695 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.5■□□□□ 0.55
APEX1P27695 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.49■□□□□ 0.55
APEX1P27695 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APEX1P27695 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APEX1P27695 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APEX1P27695 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APEX1P27695 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APEX1P27695 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
APEX1P27695 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APEX1P27695 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
APEX1P27695 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APEX1P27695 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.49■□□□□ 0.55
APEX1P27695 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms