Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
VARSP26640 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.2■□□□□ 0.82
VARSP26640 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.2■□□□□ 0.82
VARSP26640 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.2■□□□□ 0.82
VARSP26640 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.2■□□□□ 0.82
VARSP26640 KRT18P61-201ENST00000585825 1298 ntBASIC20.2■□□□□ 0.82
VARSP26640 AC080038.1-201ENST00000611274 1154 ntBASIC20.2■□□□□ 0.82
VARSP26640 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
VARSP26640 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VARSP26640 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VARSP26640 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
VARSP26640 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VARSP26640 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VARSP26640 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.2■□□□□ 0.82
VARSP26640 LINC01521-201ENST00000504184 1943 ntBASIC20.19■□□□□ 0.82
VARSP26640 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.19■□□□□ 0.82
VARSP26640 AP004607.4-201ENST00000530158 1459 ntBASIC20.19■□□□□ 0.82
VARSP26640 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.19■□□□□ 0.82
VARSP26640 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
VARSP26640 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VARSP26640 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VARSP26640 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VARSP26640 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VARSP26640 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.19■□□□□ 0.82
VARSP26640 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.19■□□□□ 0.82
VARSP26640 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.19■□□□□ 0.82
VARSP26640 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.19■□□□□ 0.82
VARSP26640 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.19■□□□□ 0.82
VARSP26640 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VARSP26640 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
VARSP26640 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VARSP26640 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VARSP26640 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.18■□□□□ 0.82
VARSP26640 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
VARSP26640 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.18■□□□□ 0.82
VARSP26640 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.18■□□□□ 0.82
VARSP26640 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.18■□□□□ 0.82
VARSP26640 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.18■□□□□ 0.82
VARSP26640 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.18■□□□□ 0.82
VARSP26640 AC138907.5-202ENST00000569484 235 ntBASIC20.18■□□□□ 0.82
VARSP26640 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.18■□□□□ 0.82
VARSP26640 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.18■□□□□ 0.82
VARSP26640 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.18■□□□□ 0.82
VARSP26640 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VARSP26640 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VARSP26640 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.18■□□□□ 0.82
VARSP26640 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
VARSP26640 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.18■□□□□ 0.82
VARSP26640 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.17■□□□□ 0.82
VARSP26640 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
VARSP26640 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
VARSP26640 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.17■□□□□ 0.82
VARSP26640 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.17■□□□□ 0.82
VARSP26640 AC006015.1-201ENST00000429970 570 ntBASIC20.17■□□□□ 0.82
VARSP26640 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.17■□□□□ 0.82
VARSP26640 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.17■□□□□ 0.82
VARSP26640 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
VARSP26640 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VARSP26640 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VARSP26640 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.17■□□□□ 0.82
VARSP26640 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARSP26640 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARSP26640 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VARSP26640 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
VARSP26640 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VARSP26640 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VARSP26640 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.16■□□□□ 0.82
VARSP26640 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.16■□□□□ 0.82
VARSP26640 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.16■□□□□ 0.82
VARSP26640 AC137761.2-201ENST00000561729 223 ntBASIC20.16■□□□□ 0.82
VARSP26640 AC145350.3-201ENST00000569033 163 ntBASIC20.16■□□□□ 0.82
VARSP26640 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms