Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
KCNA3P22001 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
KCNA3P22001 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
KCNA3P22001 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
KCNA3P22001 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
KCNA3P22001 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
KCNA3P22001 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.57■■□□□ 1.68
KCNA3P22001 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.56■■□□□ 1.68
KCNA3P22001 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.56■■□□□ 1.68
KCNA3P22001 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
KCNA3P22001 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
KCNA3P22001 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
KCNA3P22001 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.56■■□□□ 1.68
KCNA3P22001 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
KCNA3P22001 AC093323.1-202ENST00000635031 2045 ntBASIC25.56■■□□□ 1.68
KCNA3P22001 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KCNA3P22001 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
KCNA3P22001 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 AC026471.6-201ENST00000622954 1905 ntBASIC25.55■■□□□ 1.68
KCNA3P22001 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.55■■□□□ 1.68
KCNA3P22001 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.55■■□□□ 1.68
KCNA3P22001 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.55■■□□□ 1.68
KCNA3P22001 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.55■■□□□ 1.68
KCNA3P22001 AC145285.6-201ENST00000604632 637 ntBASIC25.55■■□□□ 1.68
KCNA3P22001 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.55■■□□□ 1.68
KCNA3P22001 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KCNA3P22001 AC087633.2-202ENST00000565166 1439 ntBASIC25.54■■□□□ 1.68
KCNA3P22001 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.54■■□□□ 1.68
KCNA3P22001 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.54■■□□□ 1.68
KCNA3P22001 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.54■■□□□ 1.68
KCNA3P22001 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
KCNA3P22001 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNA3P22001 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNA3P22001 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNA3P22001 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNA3P22001 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KCNA3P22001 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
KCNA3P22001 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.53■■□□□ 1.68
KCNA3P22001 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 MIR6786-201ENST00000616843 113 ntBASIC25.53■■□□□ 1.68
KCNA3P22001 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
KCNA3P22001 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
KCNA3P22001 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 AC005521.1-201ENST00000393351 872 ntBASIC25.52■■□□□ 1.68
KCNA3P22001 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.52■■□□□ 1.68
KCNA3P22001 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.52■■□□□ 1.68
KCNA3P22001 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
KCNA3P22001 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
KCNA3P22001 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 KRT8P9-201ENST00000558927 1449 ntBASIC25.52■■□□□ 1.68
KCNA3P22001 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.52■■□□□ 1.68
KCNA3P22001 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
KCNA3P22001 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
KCNA3P22001 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
KCNA3P22001 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KCNA3P22001 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.51■■□□□ 1.67
KCNA3P22001 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
KCNA3P22001 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.51■■□□□ 1.67
KCNA3P22001 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms