Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SDHBP21912 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SDHBP21912 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHBP21912 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHBP21912 AC113347.1-201ENST00000413321 391 ntBASIC20.26■□□□□ 0.83
SDHBP21912 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.26■□□□□ 0.83
SDHBP21912 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.26■□□□□ 0.83
SDHBP21912 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.26■□□□□ 0.83
SDHBP21912 MIR6786-201ENST00000616843 113 ntBASIC20.26■□□□□ 0.83
SDHBP21912 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHBP21912 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHBP21912 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.26■□□□□ 0.83
SDHBP21912 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SDHBP21912 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SDHBP21912 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHBP21912 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.25■□□□□ 0.83
SDHBP21912 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.25■□□□□ 0.83
SDHBP21912 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.25■□□□□ 0.83
SDHBP21912 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHBP21912 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.25■□□□□ 0.83
SDHBP21912 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHBP21912 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHBP21912 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHBP21912 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SDHBP21912 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHBP21912 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHBP21912 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHBP21912 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.24■□□□□ 0.83
SDHBP21912 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SDHBP21912 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.24■□□□□ 0.83
SDHBP21912 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.24■□□□□ 0.83
SDHBP21912 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SDHBP21912 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDHBP21912 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.24■□□□□ 0.83
SDHBP21912 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHBP21912 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SDHBP21912 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHBP21912 LINC00543-201ENST00000567234 1845 ntBASIC20.23■□□□□ 0.83
SDHBP21912 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SDHBP21912 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.23■□□□□ 0.83
SDHBP21912 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHBP21912 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.23■□□□□ 0.83
SDHBP21912 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SDHBP21912 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHBP21912 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDHBP21912 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHBP21912 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHBP21912 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHBP21912 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.23■□□□□ 0.83
SDHBP21912 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHBP21912 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SDHBP21912 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 AL137013.1-201ENST00000432946 1228 ntBASIC20.22■□□□□ 0.83
SDHBP21912 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SDHBP21912 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.22■□□□□ 0.83
SDHBP21912 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
SDHBP21912 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.22■□□□□ 0.83
SDHBP21912 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.22■□□□□ 0.83
SDHBP21912 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.22■□□□□ 0.83
SDHBP21912 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SDHBP21912 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHBP21912 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SDHBP21912 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHBP21912 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SDHBP21912 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHBP21912 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHBP21912 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.21■□□□□ 0.83
SDHBP21912 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHBP21912 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.21■□□□□ 0.83
SDHBP21912 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 NTF6B-201ENST00000591913 560 ntBASIC20.21■□□□□ 0.83
SDHBP21912 AC120498.8-201ENST00000614275 531 ntBASIC20.21■□□□□ 0.83
SDHBP21912 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHBP21912 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SDHBP21912 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms