Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CXCL3P19876 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCL3P19876 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCL3P19876 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
CXCL3P19876 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.32■□□□□ 0.36
CXCL3P19876 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CXCL3P19876 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.32■□□□□ 0.36
CXCL3P19876 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CXCL3P19876 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.32■□□□□ 0.36
CXCL3P19876 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL3P19876 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCL3P19876 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CXCL3P19876 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 AL031602.1-201ENST00000633169 911 ntBASIC17.31■□□□□ 0.36
CXCL3P19876 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CXCL3P19876 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CXCL3P19876 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL3P19876 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL3P19876 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL3P19876 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CXCL3P19876 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL3P19876 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL3P19876 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL3P19876 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL3P19876 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL3P19876 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL3P19876 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CXCL3P19876 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL3P19876 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL3P19876 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL3P19876 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CXCL3P19876 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL3P19876 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CXCL3P19876 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL3P19876 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL3P19876 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
CXCL3P19876 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL3P19876 ABHD17AP5-201ENST00000580133 923 ntBASIC17.29■□□□□ 0.36
CXCL3P19876 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL3P19876 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL3P19876 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL3P19876 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL3P19876 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL3P19876 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL3P19876 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CXCL3P19876 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL3P19876 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
CXCL3P19876 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.28■□□□□ 0.36
CXCL3P19876 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL3P19876 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.28■□□□□ 0.36
CXCL3P19876 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms