Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB1P19838 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB1P19838 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKB1P19838 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 AC091799.1-201ENST00000422823 811 ntBASIC20.98■□□□□ 0.95
NFKB1P19838 AL162430.1-201ENST00000480705 870 ntBASIC20.98■□□□□ 0.95
NFKB1P19838 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKB1P19838 AC137761.2-201ENST00000561729 223 ntBASIC20.98■□□□□ 0.95
NFKB1P19838 AC145350.3-201ENST00000569033 163 ntBASIC20.98■□□□□ 0.95
NFKB1P19838 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKB1P19838 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKB1P19838 MIR5787-201ENST00000611784 55 ntBASIC20.98■□□□□ 0.95
NFKB1P19838 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NFKB1P19838 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB1P19838 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NFKB1P19838 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
NFKB1P19838 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB1P19838 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.97■□□□□ 0.95
NFKB1P19838 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB1P19838 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
NFKB1P19838 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB1P19838 AC007225.1-201ENST00000566331 1836 ntBASIC20.97■□□□□ 0.95
NFKB1P19838 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB1P19838 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.96■□□□□ 0.95
NFKB1P19838 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NFKB1P19838 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB1P19838 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NFKB1P19838 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.96■□□□□ 0.95
NFKB1P19838 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB1P19838 AC116050.2-201ENST00000612102 1779 ntBASIC20.96■□□□□ 0.95
NFKB1P19838 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.96■□□□□ 0.95
NFKB1P19838 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB1P19838 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB1P19838 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB1P19838 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NFKB1P19838 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB1P19838 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.96■□□□□ 0.95
NFKB1P19838 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB1P19838 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 FP700111.2-201ENST00000619190 1892 ntBASIC20.95■□□□□ 0.94
NFKB1P19838 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB1P19838 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.95■□□□□ 0.94
NFKB1P19838 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NFKB1P19838 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB1P19838 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NFKB1P19838 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NFKB1P19838 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB1P19838 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NFKB1P19838 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB1P19838 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.94■□□□□ 0.94
NFKB1P19838 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NFKB1P19838 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
NFKB1P19838 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NFKB1P19838 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB1P19838 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.94■□□□□ 0.94
NFKB1P19838 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB1P19838 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB1P19838 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.94■□□□□ 0.94
NFKB1P19838 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NFKB1P19838 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.93■□□□□ 0.94
NFKB1P19838 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NFKB1P19838 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 LINC01006-201ENST00000333319 2292 ntBASIC20.93■□□□□ 0.94
NFKB1P19838 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms