Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.66■□□□□ 0.9
KRT4P19013 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT4P19013 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.65■□□□□ 0.9
KRT4P19013 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
KRT4P19013 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT4P19013 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KRT4P19013 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT4P19013 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT4P19013 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
KRT4P19013 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT4P19013 BX842568.3-201ENST00000418104 571 ntBASIC20.65■□□□□ 0.9
KRT4P19013 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT4P19013 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.64■□□□□ 0.9
KRT4P19013 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
KRT4P19013 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
KRT4P19013 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.64■□□□□ 0.9
KRT4P19013 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
KRT4P19013 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT4P19013 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT4P19013 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT4P19013 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT4P19013 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KRT4P19013 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT4P19013 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT4P19013 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
KRT4P19013 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT4P19013 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KRT4P19013 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
KRT4P19013 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT4P19013 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
KRT4P19013 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KRT4P19013 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KRT4P19013 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT4P19013 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.62■□□□□ 0.89
KRT4P19013 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.62■□□□□ 0.89
KRT4P19013 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KRT4P19013 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT4P19013 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT4P19013 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 AC005224.4-201ENST00000583262 1652 ntBASIC20.61■□□□□ 0.89
KRT4P19013 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT4P19013 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT4P19013 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT4P19013 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT4P19013 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms