Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2BFMP0C1H6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2BFMP0C1H6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
H2BFMP0C1H6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 AC105265.2-201ENST00000467189 838 ntBASIC18.17■□□□□ 0.5
H2BFMP0C1H6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.17■□□□□ 0.5
H2BFMP0C1H6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2BFMP0C1H6 AC073314.1-201ENST00000568729 2216 ntBASIC18.17■□□□□ 0.5
H2BFMP0C1H6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
H2BFMP0C1H6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 AC011484.1-201ENST00000377652 1995 ntBASIC18.15■□□□□ 0.5
H2BFMP0C1H6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 AC120498.10-201ENST00000621827 505 ntBASIC18.15■□□□□ 0.5
H2BFMP0C1H6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 FP700111.2-201ENST00000619190 1892 ntBASIC18.15■□□□□ 0.5
H2BFMP0C1H6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2BFMP0C1H6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
H2BFMP0C1H6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
H2BFMP0C1H6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.14■□□□□ 0.49
H2BFMP0C1H6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2BFMP0C1H6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
H2BFMP0C1H6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2BFMP0C1H6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2BFMP0C1H6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2BFMP0C1H6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms