Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.43■■□□□ 1.82
SNRPA1P09661 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNRPA1P09661 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.42■■□□□ 1.82
SNRPA1P09661 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNRPA1P09661 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNRPA1P09661 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNRPA1P09661 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.42■■□□□ 1.82
SNRPA1P09661 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.42■■□□□ 1.82
SNRPA1P09661 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
SNRPA1P09661 C2orf69P4-201ENST00000565394 541 ntBASIC26.42■■□□□ 1.82
SNRPA1P09661 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.42■■□□□ 1.82
SNRPA1P09661 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNRPA1P09661 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNRPA1P09661 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.42■■□□□ 1.82
SNRPA1P09661 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SNRPA1P09661 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.41■■□□□ 1.82
SNRPA1P09661 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.41■■□□□ 1.82
SNRPA1P09661 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.41■■□□□ 1.82
SNRPA1P09661 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.41■■□□□ 1.82
SNRPA1P09661 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.41■■□□□ 1.82
SNRPA1P09661 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.41■■□□□ 1.82
SNRPA1P09661 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SNRPA1P09661 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRPA1P09661 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
SNRPA1P09661 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.4■■□□□ 1.82
SNRPA1P09661 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.4■■□□□ 1.82
SNRPA1P09661 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.4■■□□□ 1.82
SNRPA1P09661 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.4■■□□□ 1.82
SNRPA1P09661 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.4■■□□□ 1.82
SNRPA1P09661 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNRPA1P09661 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNRPA1P09661 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SNRPA1P09661 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.39■■□□□ 1.82
SNRPA1P09661 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.39■■□□□ 1.82
SNRPA1P09661 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.39■■□□□ 1.82
SNRPA1P09661 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SNRPA1P09661 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SNRPA1P09661 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNRPA1P09661 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.39■■□□□ 1.82
SNRPA1P09661 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.39■■□□□ 1.81
SNRPA1P09661 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.39■■□□□ 1.81
SNRPA1P09661 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
SNRPA1P09661 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SNRPA1P09661 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.38■■□□□ 1.81
SNRPA1P09661 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRPA1P09661 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.38■■□□□ 1.81
SNRPA1P09661 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.38■■□□□ 1.81
SNRPA1P09661 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRPA1P09661 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.38■■□□□ 1.81
SNRPA1P09661 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRPA1P09661 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.38■■□□□ 1.81
SNRPA1P09661 SOX15-203ENST00000570788 1093 ntBASIC26.38■■□□□ 1.81
SNRPA1P09661 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.38■■□□□ 1.81
SNRPA1P09661 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SNRPA1P09661 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRPA1P09661 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SNRPA1P09661 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.38■■□□□ 1.81
SNRPA1P09661 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRPA1P09661 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNRPA1P09661 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNRPA1P09661 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SNRPA1P09661 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.37■■□□□ 1.81
SNRPA1P09661 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SNRPA1P09661 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.37■■□□□ 1.81
SNRPA1P09661 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
SNRPA1P09661 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNRPA1P09661 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.37■■□□□ 1.81
SNRPA1P09661 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNRPA1P09661 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
SNRPA1P09661 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SNRPA1P09661 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNRPA1P09661 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNRPA1P09661 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SNRPA1P09661 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SNRPA1P09661 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SNRPA1P09661 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SNRPA1P09661 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 KRT17P3-201ENST00000420566 1262 ntBASIC26.36■■□□□ 1.81
SNRPA1P09661 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms