Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DQB2P05538 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 AL137784.2-201ENST00000607332 1000 ntBASIC20.93■□□□□ 0.94
HLA-DQB2P05538 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQB2P05538 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DQB2P05538 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 AL591742.1-201ENST00000604433 565 ntBASIC20.91■□□□□ 0.94
HLA-DQB2P05538 AC016405.3-201ENST00000607710 860 ntBASIC20.91■□□□□ 0.94
HLA-DQB2P05538 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-DQB2P05538 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 AC027702.1-201ENST00000563810 1770 ntBASIC20.9■□□□□ 0.94
HLA-DQB2P05538 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 AC068338.2-201ENST00000563278 1430 ntBASIC20.9■□□□□ 0.94
HLA-DQB2P05538 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.9■□□□□ 0.94
HLA-DQB2P05538 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 CDV3P1-201ENST00000471403 739 ntBASIC20.9■□□□□ 0.94
HLA-DQB2P05538 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 AC080038.1-201ENST00000611274 1154 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms