Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN1SWP03999 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN1SWP03999 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.25■□□□□ 0.67
OPN1SWP03999 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
OPN1SWP03999 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OPN1SWP03999 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
OPN1SWP03999 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OPN1SWP03999 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
OPN1SWP03999 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.25■□□□□ 0.67
OPN1SWP03999 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.24■□□□□ 0.67
OPN1SWP03999 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
OPN1SWP03999 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
OPN1SWP03999 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.24■□□□□ 0.67
OPN1SWP03999 AC053503.5-201ENST00000601508 636 ntBASIC19.24■□□□□ 0.67
OPN1SWP03999 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.24■□□□□ 0.67
OPN1SWP03999 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.24■□□□□ 0.67
OPN1SWP03999 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.24■□□□□ 0.67
OPN1SWP03999 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OPN1SWP03999 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
OPN1SWP03999 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.23■□□□□ 0.67
OPN1SWP03999 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.23■□□□□ 0.67
OPN1SWP03999 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.23■□□□□ 0.67
OPN1SWP03999 AC012414.1-201ENST00000556676 535 ntBASIC19.23■□□□□ 0.67
OPN1SWP03999 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.23■□□□□ 0.67
OPN1SWP03999 AL031432.3-201ENST00000607698 485 ntBASIC19.23■□□□□ 0.67
OPN1SWP03999 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.23■□□□□ 0.67
OPN1SWP03999 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.23■□□□□ 0.67
OPN1SWP03999 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OPN1SWP03999 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.23■□□□□ 0.67
OPN1SWP03999 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.23■□□□□ 0.67
OPN1SWP03999 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.23■□□□□ 0.67
OPN1SWP03999 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.23■□□□□ 0.67
OPN1SWP03999 AP004607.4-201ENST00000530158 1459 ntBASIC19.22■□□□□ 0.67
OPN1SWP03999 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
OPN1SWP03999 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
OPN1SWP03999 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
OPN1SWP03999 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.22■□□□□ 0.67
OPN1SWP03999 AL512408.1-201ENST00000569378 2000 ntBASIC19.22■□□□□ 0.67
OPN1SWP03999 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
OPN1SWP03999 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.22■□□□□ 0.67
OPN1SWP03999 AL136967.2-201ENST00000623968 743 ntBASIC19.22■□□□□ 0.67
OPN1SWP03999 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
OPN1SWP03999 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OPN1SWP03999 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.21■□□□□ 0.67
OPN1SWP03999 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
OPN1SWP03999 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.21■□□□□ 0.67
OPN1SWP03999 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.21■□□□□ 0.67
OPN1SWP03999 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN1SWP03999 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
OPN1SWP03999 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
OPN1SWP03999 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN1SWP03999 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.2■□□□□ 0.66
OPN1SWP03999 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.2■□□□□ 0.66
OPN1SWP03999 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms