Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.59■■□□□ 1.21
CHRNA1P02708 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.59■■□□□ 1.21
CHRNA1P02708 AC233723.2-201ENST00000623798 2106 ntBASIC22.58■■□□□ 1.21
CHRNA1P02708 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHRNA1P02708 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.58■■□□□ 1.21
CHRNA1P02708 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CHRNA1P02708 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHRNA1P02708 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHRNA1P02708 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHRNA1P02708 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.58■■□□□ 1.21
CHRNA1P02708 C1QBPP2-201ENST00000528754 825 ntBASIC22.58■■□□□ 1.21
CHRNA1P02708 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.58■■□□□ 1.21
CHRNA1P02708 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.58■■□□□ 1.21
CHRNA1P02708 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.58■■□□□ 1.21
CHRNA1P02708 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.58■■□□□ 1.21
CHRNA1P02708 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.58■■□□□ 1.21
CHRNA1P02708 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHRNA1P02708 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CHRNA1P02708 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.58■■□□□ 1.2
CHRNA1P02708 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CHRNA1P02708 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
CHRNA1P02708 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CHRNA1P02708 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHRNA1P02708 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHRNA1P02708 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHRNA1P02708 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.57■■□□□ 1.2
CHRNA1P02708 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.57■■□□□ 1.2
CHRNA1P02708 C2orf69P4-201ENST00000565394 541 ntBASIC22.57■■□□□ 1.2
CHRNA1P02708 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.57■■□□□ 1.2
CHRNA1P02708 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.57■■□□□ 1.2
CHRNA1P02708 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHRNA1P02708 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CHRNA1P02708 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHRNA1P02708 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHRNA1P02708 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.57■■□□□ 1.2
CHRNA1P02708 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CHRNA1P02708 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.57■■□□□ 1.2
CHRNA1P02708 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.57■■□□□ 1.2
CHRNA1P02708 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
CHRNA1P02708 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.56■■□□□ 1.2
CHRNA1P02708 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.56■■□□□ 1.2
CHRNA1P02708 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNA1P02708 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNA1P02708 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNA1P02708 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CHRNA1P02708 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CHRNA1P02708 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.55■■□□□ 1.2
CHRNA1P02708 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNA1P02708 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.55■■□□□ 1.2
CHRNA1P02708 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.55■■□□□ 1.2
CHRNA1P02708 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.55■■□□□ 1.2
CHRNA1P02708 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.55■■□□□ 1.2
CHRNA1P02708 AC069544.1-201ENST00000609399 999 ntBASIC22.55■■□□□ 1.2
CHRNA1P02708 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNA1P02708 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.55■■□□□ 1.2
CHRNA1P02708 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.55■■□□□ 1.2
CHRNA1P02708 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
CHRNA1P02708 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNA1P02708 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.55■■□□□ 1.2
CHRNA1P02708 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNA1P02708 AC087633.2-202ENST00000565166 1439 ntBASIC22.55■■□□□ 1.2
CHRNA1P02708 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.54■■□□□ 1.2
CHRNA1P02708 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CHRNA1P02708 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.54■■□□□ 1.2
CHRNA1P02708 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 FAM197Y4-202ENST00000622692 608 ntBASIC22.54■■□□□ 1.2
CHRNA1P02708 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.54■■□□□ 1.2
CHRNA1P02708 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CHRNA1P02708 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CHRNA1P02708 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNA1P02708 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CHRNA1P02708 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CHRNA1P02708 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CHRNA1P02708 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.53■■□□□ 1.2
CHRNA1P02708 POM121L13P-201ENST00000422362 380 ntBASIC22.53■■□□□ 1.2
CHRNA1P02708 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.53■■□□□ 1.2
CHRNA1P02708 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms