Protein–RNA interactions for Protein: O75298

RTN2, Reticulon-2, humanhuman

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2O75298 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN2O75298 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTN2O75298 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTN2O75298 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.97■■□□□ 1.11
RTN2O75298 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.97■■□□□ 1.11
RTN2O75298 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 KRT18P14-201ENST00000534205 1250 ntBASIC21.97■■□□□ 1.11
RTN2O75298 TERF1P2-201ENST00000583350 1212 ntBASIC21.97■■□□□ 1.11
RTN2O75298 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.97■■□□□ 1.11
RTN2O75298 AC022517.1-201ENST00000592429 346 ntBASIC21.97■■□□□ 1.11
RTN2O75298 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RTN2O75298 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN2O75298 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.96■■□□□ 1.11
RTN2O75298 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.96■■□□□ 1.11
RTN2O75298 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RTN2O75298 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.96■■□□□ 1.11
RTN2O75298 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.96■■□□□ 1.11
RTN2O75298 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.96■■□□□ 1.11
RTN2O75298 IKBKGP1-201ENST00000612193 1073 ntBASIC21.96■■□□□ 1.11
RTN2O75298 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.96■■□□□ 1.11
RTN2O75298 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN2O75298 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RTN2O75298 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RTN2O75298 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTN2O75298 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.95■■□□□ 1.1
RTN2O75298 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.95■■□□□ 1.1
RTN2O75298 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.95■■□□□ 1.1
RTN2O75298 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.95■■□□□ 1.1
RTN2O75298 AC104187.1-201ENST00000607510 612 ntBASIC21.95■■□□□ 1.1
RTN2O75298 AC120498.10-201ENST00000621827 505 ntBASIC21.95■■□□□ 1.1
RTN2O75298 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.95■■□□□ 1.1
RTN2O75298 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RTN2O75298 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RTN2O75298 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN2O75298 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 AC027702.1-201ENST00000563810 1770 ntBASIC21.94■■□□□ 1.1
RTN2O75298 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RTN2O75298 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
RTN2O75298 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.94■■□□□ 1.1
RTN2O75298 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RTN2O75298 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RTN2O75298 FP700111.2-201ENST00000619190 1892 ntBASIC21.94■■□□□ 1.1
RTN2O75298 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN2O75298 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN2O75298 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN2O75298 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.93■■□□□ 1.1
RTN2O75298 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTN2O75298 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.93■■□□□ 1.1
RTN2O75298 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.93■■□□□ 1.1
RTN2O75298 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
RTN2O75298 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTN2O75298 AP001160.3-201ENST00000601484 763 ntBASIC21.93■■□□□ 1.1
RTN2O75298 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTN2O75298 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN2O75298 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN2O75298 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN2O75298 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.92■■□□□ 1.1
RTN2O75298 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
RTN2O75298 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN2O75298 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN2O75298 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN2O75298 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms