Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 POU5F1P4-201ENST00000413175 1085 ntBASIC19.55■□□□□ 0.72
SCN2BO60939 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN2BO60939 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN2BO60939 RARRES2P11-201ENST00000635158 484 ntBASIC19.55■□□□□ 0.72
SCN2BO60939 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN2BO60939 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN2BO60939 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN2BO60939 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN2BO60939 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN2BO60939 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN2BO60939 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN2BO60939 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
SCN2BO60939 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SCN2BO60939 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SCN2BO60939 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 IRS3P-201ENST00000223076 1006 ntBASIC19.54■□□□□ 0.72
SCN2BO60939 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SCN2BO60939 AC079140.4-201ENST00000507448 529 ntBASIC19.54■□□□□ 0.72
SCN2BO60939 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN2BO60939 AC138907.5-202ENST00000569484 235 ntBASIC19.54■□□□□ 0.72
SCN2BO60939 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN2BO60939 AC005837.3-201ENST00000612163 286 ntBASIC19.54■□□□□ 0.72
SCN2BO60939 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.54■□□□□ 0.72
SCN2BO60939 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCN2BO60939 AL162377.1-201ENST00000618844 1793 ntBASIC19.54■□□□□ 0.72
SCN2BO60939 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SCN2BO60939 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN2BO60939 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SCN2BO60939 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.53■□□□□ 0.72
SCN2BO60939 AC027612.3-201ENST00000413684 1047 ntBASIC19.53■□□□□ 0.72
SCN2BO60939 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN2BO60939 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN2BO60939 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN2BO60939 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN2BO60939 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
SCN2BO60939 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.52■□□□□ 0.72
SCN2BO60939 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN2BO60939 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.52■□□□□ 0.72
SCN2BO60939 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN2BO60939 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 AC008175.2-201ENST00000612840 297 ntBASIC19.52■□□□□ 0.72
SCN2BO60939 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN2BO60939 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
SCN2BO60939 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCN2BO60939 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCN2BO60939 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCN2BO60939 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.52■□□□□ 0.71
SCN2BO60939 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.51■□□□□ 0.71
SCN2BO60939 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SCN2BO60939 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCN2BO60939 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.51■□□□□ 0.71
SCN2BO60939 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN2BO60939 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN2BO60939 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.51■□□□□ 0.71
SCN2BO60939 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SCN2BO60939 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN2BO60939 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN2BO60939 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN2BO60939 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SCN2BO60939 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SCN2BO60939 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms