Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
AP3D1O14617 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.21■□□□□ 0.67
AP3D1O14617 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3D1O14617 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
AP3D1O14617 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 EEF1DP3-203ENST00000566025 782 ntBASIC19.2■□□□□ 0.66
AP3D1O14617 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP3D1O14617 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
AP3D1O14617 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3D1O14617 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3D1O14617 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
AP3D1O14617 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3D1O14617 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.19■□□□□ 0.66
AP3D1O14617 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
AP3D1O14617 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3D1O14617 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.19■□□□□ 0.66
AP3D1O14617 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3D1O14617 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3D1O14617 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3D1O14617 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
AP3D1O14617 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3D1O14617 AC053503.5-201ENST00000601508 636 ntBASIC19.18■□□□□ 0.66
AP3D1O14617 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
AP3D1O14617 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
AP3D1O14617 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3D1O14617 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AP3D1O14617 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
AP3D1O14617 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 AC121338.2-201ENST00000622535 1744 ntBASIC19.17■□□□□ 0.66
AP3D1O14617 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AP3D1O14617 KRT87P-202ENST00000534226 1464 ntBASIC19.17■□□□□ 0.66
AP3D1O14617 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AP3D1O14617 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 YBX1P1-201ENST00000445822 960 ntBASIC19.17■□□□□ 0.66
AP3D1O14617 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.17■□□□□ 0.66
AP3D1O14617 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.17■□□□□ 0.66
AP3D1O14617 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.17■□□□□ 0.66
AP3D1O14617 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.17■□□□□ 0.66
AP3D1O14617 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 FEM1AP1-201ENST00000431297 1995 ntBASIC19.17■□□□□ 0.66
AP3D1O14617 PLK5-205ENST00000642079 1969 ntBASIC19.17■□□□□ 0.66
AP3D1O14617 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3D1O14617 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
AP3D1O14617 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
AP3D1O14617 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3D1O14617 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
AP3D1O14617 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
AP3D1O14617 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3D1O14617 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms