Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PDLIM1O00151 EDA-201ENST00000338901 1233 ntBASIC19.57■□□□□ 0.72
PDLIM1O00151 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM1O00151 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM1O00151 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.57■□□□□ 0.72
PDLIM1O00151 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM1O00151 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM1O00151 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDLIM1O00151 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM1O00151 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.56■□□□□ 0.72
PDLIM1O00151 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PDLIM1O00151 AC005837.3-201ENST00000612163 286 ntBASIC19.56■□□□□ 0.72
PDLIM1O00151 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
PDLIM1O00151 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.56■□□□□ 0.72
PDLIM1O00151 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDLIM1O00151 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM1O00151 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM1O00151 AC098818.2-201ENST00000564925 2320 ntBASIC19.56■□□□□ 0.72
PDLIM1O00151 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PDLIM1O00151 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.55■□□□□ 0.72
PDLIM1O00151 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDLIM1O00151 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.55■□□□□ 0.72
PDLIM1O00151 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 AC133637.1-201ENST00000624115 1537 ntBASIC19.55■□□□□ 0.72
PDLIM1O00151 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM1O00151 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM1O00151 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
PDLIM1O00151 AL355001.2-201ENST00000620617 1191 ntBASIC19.54■□□□□ 0.72
PDLIM1O00151 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.54■□□□□ 0.72
PDLIM1O00151 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM1O00151 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDLIM1O00151 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM1O00151 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM1O00151 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDLIM1O00151 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM1O00151 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM1O00151 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM1O00151 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM1O00151 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.53■□□□□ 0.72
PDLIM1O00151 SUDS3P1-201ENST00000505831 966 ntBASIC19.53■□□□□ 0.72
PDLIM1O00151 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM1O00151 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM1O00151 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM1O00151 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PDLIM1O00151 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM1O00151 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PDLIM1O00151 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM1O00151 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms