Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VGLL3A8MV65 ALDH1A3-203ENST00000557963 1670 ntBASIC20.21■□□□□ 0.83
VGLL3A8MV65 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VGLL3A8MV65 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VGLL3A8MV65 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
VGLL3A8MV65 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
VGLL3A8MV65 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VGLL3A8MV65 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 GPX1-201ENST00000419349 1106 ntBASIC20.19■□□□□ 0.82
VGLL3A8MV65 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.19■□□□□ 0.82
VGLL3A8MV65 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VGLL3A8MV65 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.19■□□□□ 0.82
VGLL3A8MV65 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 AC126177.7-201ENST00000547904 679 ntBASIC20.18■□□□□ 0.82
VGLL3A8MV65 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VGLL3A8MV65 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VGLL3A8MV65 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 AC018695.7-201ENST00000624587 2492 ntBASIC20.17■□□□□ 0.82
VGLL3A8MV65 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 MST1L-201ENST00000442552 2185 ntBASIC20.17■□□□□ 0.82
VGLL3A8MV65 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 AC022413.1-201ENST00000624602 984 ntBASIC20.17■□□□□ 0.82
VGLL3A8MV65 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VGLL3A8MV65 AC084018.2-201ENST00000613093 2607 ntBASIC20.17■□□□□ 0.82
VGLL3A8MV65 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.17■□□□□ 0.82
VGLL3A8MV65 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms