Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.96■■□□□ 1.11
RCCD1A6NED2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RCCD1A6NED2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.96■■□□□ 1.11
RCCD1A6NED2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RCCD1A6NED2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.96■■□□□ 1.11
RCCD1A6NED2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RCCD1A6NED2 AP004607.4-201ENST00000530158 1459 ntBASIC21.96■■□□□ 1.11
RCCD1A6NED2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.96■■□□□ 1.11
RCCD1A6NED2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 RNF165-205ENST00000588679 2904 ntBASIC21.95■■□□□ 1.1
RCCD1A6NED2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.95■■□□□ 1.1
RCCD1A6NED2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
RCCD1A6NED2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RCCD1A6NED2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 AC027682.1-201ENST00000562846 899 ntBASIC21.94■■□□□ 1.1
RCCD1A6NED2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.94■■□□□ 1.1
RCCD1A6NED2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.94■■□□□ 1.1
RCCD1A6NED2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RCCD1A6NED2 TCF3P1-201ENST00000423021 1937 ntBASIC21.94■■□□□ 1.1
RCCD1A6NED2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RCCD1A6NED2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
RCCD1A6NED2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RCCD1A6NED2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RCCD1A6NED2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RCCD1A6NED2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 AC096631.2-201ENST00000436136 790 ntBASIC21.92■■□□□ 1.1
RCCD1A6NED2 PBX2P1-201ENST00000493219 1291 ntBASIC21.92■■□□□ 1.1
RCCD1A6NED2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.92■■□□□ 1.1
RCCD1A6NED2 TPRG1LP1-201ENST00000598702 760 ntBASIC21.92■■□□□ 1.1
RCCD1A6NED2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RCCD1A6NED2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 RARRES2P11-201ENST00000635158 484 ntBASIC21.91■■□□□ 1.1
RCCD1A6NED2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
RCCD1A6NED2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.91■■□□□ 1.1
RCCD1A6NED2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RCCD1A6NED2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.91■■□□□ 1.1
RCCD1A6NED2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 AC125437.2-201ENST00000625180 2167 ntBASIC21.9■■□□□ 1.1
RCCD1A6NED2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms