Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRDV1A0A1B0GX56 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRDV1A0A1B0GX56 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRDV1A0A1B0GX56 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 AC125437.2-201ENST00000625180 2167 ntBASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRDV1A0A1B0GX56 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRDV1A0A1B0GX56 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 AC239859.2-201ENST00000444165 318 ntBASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 AC092171.4-201ENST00000609130 632 ntBASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRDV1A0A1B0GX56 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.09■□□□□ 0.49
TRDV1A0A1B0GX56 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms