Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 KRT18P60-201ENST00000312876 1297 ntBASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 AL451085.2-201ENST00000605085 799 ntBASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 U85056.1-201ENST00000616429 682 ntBASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV1-1A0A0B4J248 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 PVT1_1.1-201ENST00000615125 194 ntBASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 AP006587.3-201ENST00000525742 1516 ntBASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV1-1A0A0B4J248 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV1-1A0A0B4J248 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 AC011484.1-201ENST00000377652 1995 ntBASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 AC093503.3-201ENST00000624917 2352 ntBASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV1-1A0A0B4J248 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV1-1A0A0B4J248 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV1-1A0A0B4J248 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV1-1A0A0B4J248 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV1-1A0A0B4J248 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV1-1A0A0B4J248 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAV1-1A0A0B4J248 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms