Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 AL162377.1-201ENST00000618844 1793 ntBASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-2A0A0B4J235 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 AC120498.9-201ENST00000339021 3867 ntBASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 AL034346.1-201ENST00000568244 1277 ntBASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-2A0A0B4J235 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 AC098818.2-201ENST00000564925 2320 ntBASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 AL031602.1-201ENST00000633169 911 ntBASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-2A0A0B4J235 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 AC112907.3-201ENST00000577781 2400 ntBASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-2A0A0B4J235 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms