Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.25■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LINC01521-201ENST00000504184 1943 ntBASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 MYCNOS-205ENST00000641950 531 ntBASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AL121603.2-201ENST00000557373 2117 ntBASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC243732.1-201ENST00000612648 864 ntBASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 AC116050.2-201ENST00000612102 1779 ntBASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
IGKV1D-43A0A0B4J1Z2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms