Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.55■□□□□ 0.56
TRGV5A0A0B4J1U4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV5A0A0B4J1U4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 FBXW4P1-201ENST00000426721 2239 ntBASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 KRT18P29-201ENST00000397031 1267 ntBASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 EP400NL-214ENST00000641289 2402 ntBASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRGV5A0A0B4J1U4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 PKD1P6-201ENST00000343738 4769 ntBASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 ITM2C-210ENST00000620962 501 ntBASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 AC105020.6-201ENST00000621523 1217 ntBASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV5A0A0B4J1U4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.52■□□□□ 0.55
TRGV5A0A0B4J1U4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRGV5A0A0B4J1U4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRGV5A0A0B4J1U4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRGV5A0A0B4J1U4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 PGM5P4-201ENST00000421970 445 ntBASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.51■□□□□ 0.55
TRGV5A0A0B4J1U4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms