Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 AP003097.1-201ENST00000530657 1135 ntBASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 AC105020.6-201ENST00000621523 1217 ntBASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.41■■□□□ 1.02
TRAV19A0A0A6YYK7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV19A0A0A6YYK7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.39■■□□□ 1.02
TRAV19A0A0A6YYK7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV19A0A0A6YYK7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV19A0A0A6YYK7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
TRAV19A0A0A6YYK7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 AC128676.1-201ENST00000454392 318 ntBASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 AC087633.2-202ENST00000565166 1439 ntBASIC21.38■■□□□ 1.01
TRAV19A0A0A6YYK7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 AL117328.2-201ENST00000624617 1940 ntBASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV19A0A0A6YYK7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 AC092368.3-202ENST00000574180 1591 ntBASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 PGM5P4-201ENST00000421970 445 ntBASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 PNMA6B-201ENST00000538162 1200 ntBASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV19A0A0A6YYK7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRAV19A0A0A6YYK7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms