Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC027702.1-201ENST00000563810 1770 ntBASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC007225.1-201ENST00000566331 1836 ntBASIC17.24■□□□□ 0.35
TRBV6-7A0A0A0MS04 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 AL162377.1-201ENST00000618844 1793 ntBASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 MIR572-201ENST00000384983 95 ntBASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC131212.1-201ENST00000613771 668 ntBASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 AC020907.5-201ENST00000624372 1936 ntBASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-7A0A0A0MS04 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms