Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC02142-201ENST00000500616 577 ntTSL 3 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AL162431.3-201ENST00000503142 537 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 MAFA-AS1-201ENST00000519762 417 ntTSL 2 BASIC9.96□□□□□ -0.82
SLC1A1P43005 RPS26-203ENST00000552361 623 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 AC044798.2-201ENST00000564222 1235 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 RN7SL744P-201ENST00000577604 267 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 RN7SL509P-201ENST00000579670 297 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 AFMID-214ENST00000591952 582 ntTSL 2 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AC073254.1-210ENST00000597495 635 ntTSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 LSP1P1-201ENST00000599825 133 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 AC093107.2-201ENST00000603668 445 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 AL110115.2-201ENST00000611296 325 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 AC106886.3-201ENST00000621583 547 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 AC131025.2-201ENST00000622374 422 ntTSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AC022400.7-201ENST00000625041 1236 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 AP003500.1-201ENST00000626400 527 ntTSL 4 BASIC9.96□□□□□ -0.82
SLC1A1P43005 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 RBFOX2-202ENST00000359369 1409 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 AC020951.1-201ENST00000624361 2271 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SLC1A1P43005 HAPLN1-201ENST00000274341 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
SLC1A1P43005 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC9.95□□□□□ -0.82
SLC1A1P43005 NUDT5-201ENST00000378927 1258 ntTSL 2 BASIC9.95□□□□□ -0.82
SLC1A1P43005 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 DEFA1-202ENST00000382692 485 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 RPL35P3-201ENST00000403133 371 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC9.95□□□□□ -0.82
SLC1A1P43005 RN7SL294P-201ENST00000477271 295 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 RN7SL141P-201ENST00000484215 266 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC114744.1-201ENST00000498116 666 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC9.95□□□□□ -0.82
SLC1A1P43005 ACA64.6-201ENST00000516310 117 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC084121.2-201ENST00000528788 264 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC012317.1-201ENST00000563611 534 ntTSL 4 BASIC9.95□□□□□ -0.82
SLC1A1P43005 AC007749.1-201ENST00000564299 585 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 ELOCP2-201ENST00000566760 332 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC9.95□□□□□ -0.82
SLC1A1P43005 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 LINC00339-210ENST00000635675 1404 ntTSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC9.95□□□□□ -0.82
SLC1A1P43005 AC092375.2-201ENST00000567370 1665 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 AC009021.2-201ENST00000567401 1666 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 TRIM43B-202ENST00000639673 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 HSPA8P8-201ENST00000419827 1942 ntBASIC9.95□□□□□ -0.82
SLC1A1P43005 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC9.95□□□□□ -0.82
SLC1A1P43005 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC9.95□□□□□ -0.82
SLC1A1P43005 CHRNA9-201ENST00000310169 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 HLF-208ENST00000573945 2977 ntTSL 5 BASIC9.95□□□□□ -0.82
SLC1A1P43005 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SLC1A1P43005 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SLC1A1P43005 ASTN2-204ENST00000358637 3411 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 PAX6-246ENST00000638963 1580 ntTSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms