Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MRPS31P4-201ENST00000509685 898 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 BIN3-207ENST00000520292 775 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 ELOCP22-201ENST00000529735 334 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 AP001652.1-201ENST00000531918 643 ntTSL 3 BASIC8.83□□□□□ -1
SNX18Q96RF0 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC8.83□□□□□ -1
SNX18Q96RF0 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC8.83□□□□□ -1
SNX18Q96RF0 ASIP-202ENST00000568305 610 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 AC108134.2-201ENST00000570843 748 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 AC007595.1-201ENST00000576710 483 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 RN7SL663P-201ENST00000578592 299 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 AC125437.1-201ENST00000586389 714 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 AC002116.2-201ENST00000586962 643 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 LINC01255-205ENST00000591318 708 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 ZNF611-207ENST00000596702 538 ntTSL 4 BASIC8.83□□□□□ -1
SNX18Q96RF0 LSP1P1-201ENST00000599825 133 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 IK-211ENST00000610522 737 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 SLC25A15P4-201ENST00000614260 289 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 MARK2P11-201ENST00000518523 1670 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 DMGDH-201ENST00000255189 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 AC026887.1-201ENST00000624657 2985 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 TTC39A-201ENST00000262675 2173 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 TEX9-202ENST00000537232 1768 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 ERICH6B-201ENST00000298738 2421 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 AL049776.1-201ENST00000624600 2025 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 RNF185-201ENST00000266252 2946 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 AC020951.1-201ENST00000624361 2271 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
SNX18Q96RF0 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 INTS12-201ENST00000340139 1710 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 AC068733.1-202ENST00000531479 2456 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 EAPP-201ENST00000250454 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC8.82□□□□□ -1
SNX18Q96RF0 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC8.82□□□□□ -1
SNX18Q96RF0 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC8.82□□□□□ -1
SNX18Q96RF0 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 OR6Y1-201ENST00000302617 978 ntAPPRIS P1 BASIC8.82□□□□□ -1
SNX18Q96RF0 SCGB1D1-201ENST00000306238 453 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC8.82□□□□□ -1
SNX18Q96RF0 RNASE1-204ENST00000412779 896 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SNX18Q96RF0 GTF3C2-AS1-201ENST00000416453 863 ntTSL 2 BASIC8.82□□□□□ -1
SNX18Q96RF0 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC8.82□□□□□ -1
SNX18Q96RF0 AL450311.2-201ENST00000428753 503 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 AL139260.1-201ENST00000433671 630 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 AC131235.1-201ENST00000433853 732 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 AL445493.2-201ENST00000442684 945 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 AL132838.1-201ENST00000469219 542 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 AC120036.1-201ENST00000479243 654 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 CUTA-213ENST00000494751 731 ntTSL 5 BASIC8.82□□□□□ -1
SNX18Q96RF0 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC8.82□□□□□ -1
SNX18Q96RF0 AC139365.1-201ENST00000519417 322 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 AC107918.1-201ENST00000528715 967 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 AL079352.1-201ENST00000547237 1042 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 AC137055.1-201ENST00000549333 395 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 AC009779.5-201ENST00000556606 488 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC8.82□□□□□ -1
SNX18Q96RF0 AC130343.1-201ENST00000576540 459 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 RN7SL744P-201ENST00000577604 267 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 MIR3663-201ENST00000583207 97 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 ZNF506-207ENST00000587461 831 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 AC011481.1-201ENST00000591646 361 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 SMCO4P1-201ENST00000592909 177 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC8.82□□□□□ -1
SNX18Q96RF0 AC126283.1-201ENST00000609440 364 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.82□□□□□ -1
SNX18Q96RF0 NPSR1-204ENST00000381542 1369 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.82□□□□□ -1
SNX18Q96RF0 MCPH1-203ENST00000519480 2917 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 AC073539.1-201ENST00000599810 2094 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
SNX18Q96RF0 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms