Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 GCSHP5-201ENST00000443090 522 ntBASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 AC128676.1-201ENST00000454392 318 ntBASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 AP003097.1-201ENST00000530657 1135 ntBASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 AC060766.5-201ENST00000590539 871 ntBASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 AP006294.2-201ENST00000641667 209 ntBASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G3Q9Y6M4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 AC098590.1-201ENST00000468126 897 ntBASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1G3Q9Y6M4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G3Q9Y6M4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 RPS2P52-201ENST00000469610 820 ntBASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CSNK1G3Q9Y6M4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1G3Q9Y6M4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms