Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 AL024507.2-201ENST00000606070 2574 ntBASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 AC105036.2-201ENST00000569468 176 ntBASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DNMT3AQ9Y6K1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNMT3AQ9Y6K1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DNMT3AQ9Y6K1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DNMT3AQ9Y6K1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
DNMT3AQ9Y6K1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
DNMT3AQ9Y6K1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
DNMT3AQ9Y6K1 AC011484.1-201ENST00000377652 1995 ntBASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 TSPY6P-201ENST00000448518 926 ntBASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 AL109923.1-201ENST00000618799 583 ntBASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DNMT3AQ9Y6K1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNMT3AQ9Y6K1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 SLC29A4P1-201ENST00000398760 971 ntBASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 AC104771.1-201ENST00000603335 964 ntBASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 AC010980.2-201ENST00000587099 1412 ntBASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNMT3AQ9Y6K1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms