Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 AL157384.1-201ENST00000445995 2473 ntBASIC19.46■□□□□ 0.71
GPC6Q9Y625 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 AC027612.3-201ENST00000413684 1047 ntBASIC19.46■□□□□ 0.71
GPC6Q9Y625 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC6Q9Y625 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GPC6Q9Y625 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.45■□□□□ 0.7
GPC6Q9Y625 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC6Q9Y625 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.45■□□□□ 0.7
GPC6Q9Y625 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC6Q9Y625 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC6Q9Y625 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.44■□□□□ 0.7
GPC6Q9Y625 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC6Q9Y625 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC6Q9Y625 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC6Q9Y625 MIR6084-201ENST00000622012 110 ntBASIC19.44■□□□□ 0.7
GPC6Q9Y625 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC6Q9Y625 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GPC6Q9Y625 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC6Q9Y625 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GPC6Q9Y625 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms