Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SCN10AQ9Y5Y9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 RN7SL471P-201ENST00000580476 299 ntBASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 AL356652.1-201ENST00000615962 565 ntBASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SCN10AQ9Y5Y9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 MTDHP1-201ENST00000605323 784 ntBASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SCN10AQ9Y5Y9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SCN10AQ9Y5Y9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SCN10AQ9Y5Y9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.83■■□□□ 1.24
SCN10AQ9Y5Y9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.83■■□□□ 1.24
SCN10AQ9Y5Y9 Z99916.2-201ENST00000604037 246 ntBASIC22.83■■□□□ 1.24
SCN10AQ9Y5Y9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SCN10AQ9Y5Y9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 AC133681.1-201ENST00000465482 601 ntBASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCN10AQ9Y5Y9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 AC073912.3-201ENST00000624414 853 ntBASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SCN10AQ9Y5Y9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms