Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC121338.2-201ENST00000622535 1744 ntBASIC20.02■□□□□ 0.79
PCDHGA11Q9Y5H2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 AP001160.3-201ENST00000601484 763 ntBASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA11Q9Y5H2 AC006128.1-201ENST00000624704 1661 ntBASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA11Q9Y5H2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 KRT18P20-201ENST00000548986 1279 ntBASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 PLK5-205ENST00000642079 1969 ntBASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 LINC01006-201ENST00000333319 2292 ntBASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA11Q9Y5H2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA11Q9Y5H2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 AC004854.2-201ENST00000608450 1441 ntBASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA11Q9Y5H2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 AC245052.3-201ENST00000450182 901 ntBASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms