Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 AL137784.2-201ENST00000607332 1000 ntBASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGB3Q9Y5G1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 AC092667.1-201ENST00000434301 2586 ntBASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 AC053503.5-201ENST00000601508 636 ntBASIC19.55■□□□□ 0.72
PCDHGB3Q9Y5G1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB3Q9Y5G1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 AC079140.4-201ENST00000507448 529 ntBASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB3Q9Y5G1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 EEF1DP3-203ENST00000566025 782 ntBASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms