Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC4Q9Y5F7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 AC116050.2-201ENST00000612102 1779 ntBASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 CYP2T1P-201ENST00000432607 1285 ntBASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.87■□□□□ 0.93
PCDHGC4Q9Y5F7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 AC006970.2-201ENST00000450065 779 ntBASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGC4Q9Y5F7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 AC121338.2-201ENST00000622535 1744 ntBASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 CDV3P1-201ENST00000471403 739 ntBASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 AL162412.1-201ENST00000567129 965 ntBASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGC4Q9Y5F7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 AC007322.3-201ENST00000426526 701 ntBASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 PLK5-205ENST00000642079 1969 ntBASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGC4Q9Y5F7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 AC011484.1-201ENST00000377652 1995 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms