Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 ABHD17AP1-201ENST00000358206 933 ntBASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 MCRIP2P1-201ENST00000394346 511 ntBASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 RNA5SP413-201ENST00000516373 109 ntBASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 TSPY20P-201ENST00000450910 630 ntBASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 AC083880.1-201ENST00000608266 535 ntBASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 MYC-209ENST00000641252 345 ntBASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00588Q9Y4M8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 MIR4651-201ENST00000582622 73 ntBASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 AL589743.5-201ENST00000616611 1050 ntBASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 Z98882.1-201ENST00000622160 2253 ntBASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00588Q9Y4M8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00588Q9Y4M8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms