Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHTOPQ9Y3Y2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 DUX4L9-201ENST00000449051 1259 ntBASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 AC120024.1-201ENST00000562672 995 ntBASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHTOPQ9Y3Y2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 ABHD17AP4-201ENST00000411545 909 ntBASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHTOPQ9Y3Y2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 SMG8-203ENST00000578922 2178 ntBASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHTOPQ9Y3Y2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHTOPQ9Y3Y2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 AC018445.3-201ENST00000624177 1945 ntBASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.76□□□□□ -0.05
CHTOPQ9Y3Y2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms