Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.49■□□□□ 0.55
EXOSC1Q9Y3B2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.49■□□□□ 0.55
EXOSC1Q9Y3B2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
EXOSC1Q9Y3B2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
EXOSC1Q9Y3B2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.49■□□□□ 0.55
EXOSC1Q9Y3B2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXOSC1Q9Y3B2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXOSC1Q9Y3B2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 SLC47A1P1-202ENST00000449666 945 ntBASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXOSC1Q9Y3B2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 SMUG1P1-201ENST00000590640 811 ntBASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXOSC1Q9Y3B2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
EXOSC1Q9Y3B2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 MIR3621-201ENST00000580529 85 ntBASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 AC136469.2-201ENST00000623944 1028 ntBASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EXOSC1Q9Y3B2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 BX005040.4-201ENST00000637145 1518 ntBASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 SMG8-203ENST00000578922 2178 ntBASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 AC011484.1-201ENST00000377652 1995 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms