Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 AC006128.1-201ENST00000624704 1661 ntBASIC19.28■□□□□ 0.68
IFT52Q9Y366 IRS3P-201ENST00000223076 1006 ntBASIC19.28■□□□□ 0.68
IFT52Q9Y366 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 AC005837.3-201ENST00000612163 286 ntBASIC19.28■□□□□ 0.68
IFT52Q9Y366 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 AP004607.4-201ENST00000530158 1459 ntBASIC19.28■□□□□ 0.68
IFT52Q9Y366 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IFT52Q9Y366 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT52Q9Y366 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT52Q9Y366 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
IFT52Q9Y366 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
IFT52Q9Y366 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.27■□□□□ 0.68
IFT52Q9Y366 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
IFT52Q9Y366 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT52Q9Y366 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT52Q9Y366 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
IFT52Q9Y366 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
IFT52Q9Y366 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.27■□□□□ 0.67
IFT52Q9Y366 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.27■□□□□ 0.67
IFT52Q9Y366 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
IFT52Q9Y366 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.27■□□□□ 0.67
IFT52Q9Y366 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.26■□□□□ 0.67
IFT52Q9Y366 AC121338.2-201ENST00000622535 1744 ntBASIC19.26■□□□□ 0.67
IFT52Q9Y366 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
IFT52Q9Y366 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT52Q9Y366 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
IFT52Q9Y366 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT52Q9Y366 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.26■□□□□ 0.67
IFT52Q9Y366 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 FEM1AP1-201ENST00000431297 1995 ntBASIC19.26■□□□□ 0.67
IFT52Q9Y366 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT52Q9Y366 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 AC079140.4-201ENST00000507448 529 ntBASIC19.25■□□□□ 0.67
IFT52Q9Y366 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 AC008175.2-201ENST00000612840 297 ntBASIC19.25■□□□□ 0.67
IFT52Q9Y366 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT52Q9Y366 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT52Q9Y366 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
IFT52Q9Y366 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT52Q9Y366 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.24■□□□□ 0.67
IFT52Q9Y366 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT52Q9Y366 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms