Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
SATB2Q9UPW6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SATB2Q9UPW6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 GCSHP5-201ENST00000443090 522 ntBASIC20.17■□□□□ 0.82
SATB2Q9UPW6 AC091874.3-201ENST00000512672 1195 ntBASIC20.17■□□□□ 0.82
SATB2Q9UPW6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SATB2Q9UPW6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.16■□□□□ 0.82
SATB2Q9UPW6 AL158047.1-201ENST00000445918 881 ntBASIC20.16■□□□□ 0.82
SATB2Q9UPW6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 AC006058.3-201ENST00000606217 1069 ntBASIC20.16■□□□□ 0.82
SATB2Q9UPW6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SATB2Q9UPW6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 AL591742.1-201ENST00000604433 565 ntBASIC20.15■□□□□ 0.82
SATB2Q9UPW6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 AC010980.2-201ENST00000587099 1412 ntBASIC20.15■□□□□ 0.82
SATB2Q9UPW6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SATB2Q9UPW6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
SATB2Q9UPW6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SATB2Q9UPW6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SATB2Q9UPW6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SATB2Q9UPW6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SATB2Q9UPW6 LINC00565-201ENST00000562710 2331 ntBASIC20.14■□□□□ 0.82
SATB2Q9UPW6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms