Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSR3Q9UNL2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.43■□□□□ 0.54
SSR3Q9UNL2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSR3Q9UNL2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 YBX1P4-201ENST00000392794 808 ntBASIC18.42■□□□□ 0.54
SSR3Q9UNL2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR3Q9UNL2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 BX664725.1-201ENST00000438252 379 ntBASIC18.41■□□□□ 0.54
SSR3Q9UNL2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 FP700111.2-201ENST00000619190 1892 ntBASIC18.41■□□□□ 0.54
SSR3Q9UNL2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR3Q9UNL2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 AC103834.1-201ENST00000520383 144 ntBASIC18.4■□□□□ 0.54
SSR3Q9UNL2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR3Q9UNL2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSR3Q9UNL2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.39■□□□□ 0.54
SSR3Q9UNL2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR3Q9UNL2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 TSPY13P-201ENST00000338964 914 ntBASIC18.38■□□□□ 0.53
SSR3Q9UNL2 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 pRNA.6-201ENST00000610482 90 ntBASIC18.38■□□□□ 0.53
SSR3Q9UNL2 pRNA.5-201ENST00000612139 90 ntBASIC18.38■□□□□ 0.53
SSR3Q9UNL2 pRNA.11-201ENST00000618423 90 ntBASIC18.38■□□□□ 0.53
SSR3Q9UNL2 pRNA.13-201ENST00000619112 90 ntBASIC18.38■□□□□ 0.53
SSR3Q9UNL2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR3Q9UNL2 AC116562.4-201ENST00000641316 2276 ntBASIC18.38■□□□□ 0.53
SSR3Q9UNL2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms